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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43172 Canola nucleus 83.78 77.11
CDY12444 Canola nucleus 85.41 65.83
CDY27171 Canola nucleus 84.86 65.42
Bra038403.1-P Field mustard cytosol, extracellular, nucleus 84.32 65.0
GSMUA_Achr6P20140_001 Banana extracellular 50.27 48.69
CDX98234 Canola cytosol 42.7 45.93
GSMUA_AchrUn_... Banana nucleus 53.51 44.39
GSMUA_Achr7P03600_001 Banana nucleus 52.97 43.36
KRH12195 Soybean cytosol 58.92 42.75
VIT_01s0011g01410.t01 Wine grape nucleus 60.0 42.53
KRH42391 Soybean nucleus 45.95 42.5
KRH37216 Soybean cytosol 58.38 41.86
Solyc02g068510.1.1 Tomato cytosol 54.05 41.49
KRH58510 Soybean nucleus 43.24 40.2
GSMUA_Achr2P02580_001 Banana nucleus 45.41 39.62
GSMUA_Achr9P30790_001 Banana nucleus 48.65 39.47
GSMUA_Achr8P33510_001 Banana cytosol, mitochondrion, nucleus, plastid 51.35 39.09
TraesCS6A01G156600.1 Wheat cytosol 50.81 38.68
TraesCS6D01G146600.1 Wheat cytosol 50.81 38.68
EER90181 Sorghum cytosol 50.81 38.06
Zm00001d046958_P001 Maize nucleus 50.81 37.6
TraesCS7A01G479100.1 Wheat nucleus 51.35 37.25
EES04603 Sorghum nucleus 51.89 37.21
TraesCS7B01G381500.1 Wheat nucleus 51.35 37.11
TraesCS7D01G466400.1 Wheat nucleus 50.81 37.01
Os02t0172800-01 Rice cytosol 48.11 36.93
HORVU7Hr1G108680.1 Barley nucleus 50.27 36.61
Os06t0666100-01 Rice nucleus 51.35 36.4
Zm00001d015394_P001 Maize cytosol 51.35 35.98
CDY41149 Canola cytosol, extracellular, nucleus 34.05 27.39
CDX89067 Canola cytosol 36.22 27.02
CDY48369 Canola cytosol 36.22 26.91
CDX71792 Canola cytosol 35.14 26.75
CDY30518 Canola cytosol 27.57 26.7
CDX81439 Canola cytosol 36.76 26.56
CDY37203 Canola cytosol 36.22 26.27
CDX71409 Canola nucleus 26.49 26.06
CDY04518 Canola nucleus 26.49 25.93
CDX93111 Canola cytosol 36.76 24.55
CDX89603 Canola cytosol 36.76 24.55
CDY36264 Canola nucleus 23.78 22.92
CDX90437 Canola nucleus 26.49 22.9
CDY01500 Canola nucleus 26.49 22.9
CDX76551 Canola nucleus 27.57 22.77
CDY08880 Canola nucleus 27.03 22.32
CDY03199 Canola nucleus 27.03 22.22
CDY69910 Canola nucleus 27.03 22.12
CDY69918 Canola nucleus 27.03 22.12
CDY44504 Canola nucleus 27.03 22.03
CDX78810 Canola nucleus 27.03 22.03
CDY35177 Canola nucleus 27.03 21.83
CDX88300 Canola nucleus 27.03 21.1
CDY66745 Canola nucleus 25.41 21.08
CDX87583 Canola nucleus 27.03 21.01
CDY72135 Canola cytosol, nucleus 24.32 20.93
CDY01340 Canola cytosol 25.95 20.6
CDX68093 Canola nucleus 26.49 20.5
CDY33661 Canola cytosol 26.49 20.16
CDY04591 Canola cytosol 26.49 20.08
CDY29486 Canola cytosol 26.49 20.08
CDY00356 Canola cytosol 25.95 19.67
CDX85958 Canola nucleus 25.95 19.2
CDY09414 Canola cytosol 22.7 19.09
CDX87686 Canola nucleus 23.78 19.05
CDY17645 Canola nucleus 23.78 18.88
CDX96610 Canola cytosol 26.49 18.56
CDX87684 Canola nucleus 23.24 18.3
CDX84082 Canola cytosol, endoplasmic reticulum, vacuole 25.95 16.9
CDY44664 Canola plasma membrane 25.95 16.33
CDY06424 Canola cytosol 16.22 13.16
CDY01253 Canola cytosol, endoplasmic reticulum, golgi, plastid 23.24 11.81
Protein Annotations
EnsemblPlants:CDY02353EnsemblPlantsGene:GSBRNA2T00113839001InterPro:DUF597PANTHER:PTHR31065PANTHER:PTHR31065:SF32PFAM:PF04640
ProteinID:CDY02353ProteinID:CDY02353.1SEG:segUniParc:UPI0004EF2F01MapMan:15.5.43:
Description
BnaA09g25490D
Coordinates
chrLK031933:-:843893..846745
Molecular Weight (calculated)
21383.6 Da
IEP (calculated)
8.195
GRAVY (calculated)
-0.451
Length
185 amino acids
Sequence
(BLAST)
001: MIYDLRISVL LKTLKKIVRR YVYHDVVRLS DLEKLIDCSY IQPYTNNGAR VIFINQRPQS RVKVSSNVCF TCDRILQEPF HFCSLSCKVD YLVYQGDDLS
101: SILYRIDESD FTFLSLRMDG HDQLGEISTM EDETDDIVVI SDQSEQGNNS NKEKRKKKKE SNYLPGMVLS VGSRRKGAPH RAPFS
Best Arabidopsis Sequence Match ( AT1G31040.1 )
(BLAST)
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.