Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 67.02 | 57.4 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 65.97 | 55.75 |
| CDY02353 | Canola | mitochondrion, nucleus | 48.69 | 50.27 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 55.5 | 50.0 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 58.64 | 49.12 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 61.26 | 48.15 |
| CDY43172 | Canola | nucleus | 47.64 | 45.27 |
| Solyc02g068510.1.1 | Tomato | cytosol | 56.02 | 44.4 |
| AT1G31040.1 | Thale cress | nucleus | 53.4 | 41.98 |
| CDY12444 | Canola | nucleus | 52.36 | 41.67 |
| CDY27171 | Canola | nucleus | 52.36 | 41.67 |
| Bra014899.1-P | Field mustard | nucleus | 53.4 | 41.46 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 51.83 | 41.25 |
| KRH37216 | Soybean | cytosol | 54.45 | 40.31 |
| KRH12195 | Soybean | cytosol | 53.4 | 40.0 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 53.93 | 39.46 |
| KRH42391 | Soybean | nucleus | 40.84 | 39.0 |
| CDX98234 | Canola | cytosol | 35.08 | 38.95 |
| KRH58510 | Soybean | nucleus | 38.74 | 37.19 |
| GSMUA_Achr11P... | Banana | cytosol | 40.84 | 33.48 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 41.36 | 31.85 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 38.74 | 29.6 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 27.75 | 28.8 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.37 | 28.71 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 28.8 | 27.23 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 39.27 | 26.32 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 38.22 | 25.7 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.8 | 25.7 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 29.84 | 25.11 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 27.75 | 24.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.7 | 23.5 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 27.75 | 21.9 |
| GSMUA_Achr5P03420_001 | Banana | cytosol | 27.23 | 21.85 |
| Bra023155.1-P | Field mustard | nucleus | 37.17 | 21.85 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 26.18 | 21.74 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 28.27 | 21.69 |
| GSMUA_Achr5P18120_001 | Banana | nucleus | 27.23 | 21.67 |
| GSMUA_Achr11P... | Banana | nucleus | 26.18 | 20.75 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 27.75 | 20.7 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 27.23 | 20.55 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P20140_001 | EnsemblPlants:GSMUA_Achr6T20140_001 | EnsemblPlantsGene:GSMUA_Achr6G20140_001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 |
| PFAM:PF04640 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000294B97D | UniProt:M0T8L2 | MapMan:15.5.43 |
Description
zinc-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G20140_001]
Coordinates
chr6:+:14593123..14594129
Molecular Weight (calculated)
21373.9 Da
IEP (calculated)
8.422
GRAVY (calculated)
-0.064
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MFAQLLVCLL VICFCNQITT ILVRFCWASL TTALVRRYVY NDVVRLDDLE KLIDCSFVQP YTINSAKAVF LKPRPQSRPP KVSGNICLTC DRILQDGFHF
101: CSLSCKVDHI MLRGEDLSSI LFRFDESDFT VSHFECLRVD GTDPLDEDRN SPGGGGGGGR TKHKSGGGFF PQMVLSLSNR RKGAPRRSPM S
101: CSLSCKVDHI MLRGEDLSSI LFRFDESDFT VSHFECLRVD GTDPLDEDRN SPGGGGGGGR TKHKSGGGFF PQMVLSLSNR RKGAPRRSPM S
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.