Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P20650_001 | Banana | cytosol | 63.44 | 78.26 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 64.76 | 72.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.56 | 70.3 |
| Bra012263.1-P | Field mustard | cytosol | 54.63 | 62.31 |
| CDY01340 | Canola | cytosol | 63.0 | 61.37 |
| Bra016441.1-P | Field mustard | cytosol | 65.2 | 60.91 |
| CDY04591 | Canola | cytosol | 65.2 | 60.66 |
| CDY29486 | Canola | cytosol | 65.2 | 60.66 |
| Bra025865.1-P | Field mustard | cytosol | 65.2 | 60.66 |
| AT1G21000.1 | Thale cress | cytosol | 65.64 | 60.57 |
| CDY33661 | Canola | cytosol | 64.76 | 60.49 |
| PGSC0003DMT400025721 | Potato | plastid | 46.26 | 60.34 |
| CDX87583 | Canola | nucleus | 63.0 | 60.08 |
| Bra015731.1-P | Field mustard | nucleus | 63.0 | 60.08 |
| CDX88300 | Canola | nucleus | 62.56 | 59.92 |
| Bra003715.1-P | Field mustard | nucleus | 43.17 | 59.39 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 62.56 | 58.68 |
| TraesCS7A01G394800.1 | Wheat | cytosol | 62.56 | 58.68 |
| CDX68093 | Canola | nucleus | 61.67 | 58.58 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 62.11 | 58.26 |
| CDY00356 | Canola | cytosol | 62.56 | 58.2 |
| AT1G76590.1 | Thale cress | cytosol | 62.56 | 57.96 |
| HORVU7Hr1G093120.4 | Barley | cytosol | 59.47 | 56.49 |
| Os06t0624900-01 | Rice | cytosol | 62.11 | 55.73 |
| CDX96610 | Canola | cytosol | 64.76 | 55.68 |
| CDX85958 | Canola | nucleus | 60.79 | 55.2 |
| OQU76729 | Sorghum | cytosol, plastid | 60.79 | 53.91 |
| AT1G43000.2 | Thale cress | cytosol | 48.9 | 49.78 |
| GSMUA_Achr5P18120_001 | Banana | nucleus | 52.42 | 49.58 |
| GSMUA_Achr5P03420_001 | Banana | cytosol | 50.22 | 47.9 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 48.46 | 47.83 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 49.34 | 46.28 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 50.66 | 46.18 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.61 | 45.62 |
| GSMUA_Achr11P... | Banana | nucleus | 47.58 | 44.81 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 49.78 | 44.66 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 41.85 | 44.19 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 48.02 | 42.58 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 60.79 | 41.95 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.48 | 35.51 |
| CDY06424 | Canola | cytosol | 34.8 | 34.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.04 | 33.63 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 32.6 | 32.74 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 30.4 | 32.55 |
| GSMUA_Achr11P... | Banana | cytosol | 33.04 | 32.19 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 32.16 | 32.02 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 33.04 | 30.86 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 25.11 | 29.84 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 32.6 | 29.84 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 29.52 | 26.8 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 32.6 | 26.06 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 31.72 | 25.26 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P12280_001 | EnsemblPlants:GSMUA_Achr9T12280_001 | EnsemblPlantsGene:GSMUA_Achr9G12280_001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF12 |
| PFAM:PF04640 | UniParc:UPI0002955400 | UniProt:M0TZN7 | MapMan:15.5.43 | : | : |
Description
Putative Uncharacterized protein At3g50808 [Source:GMGC_GENE;Acc:GSMUA_Achr9G12280_001]
Coordinates
chr9:-:8009019..8010182
Molecular Weight (calculated)
25270.4 Da
IEP (calculated)
8.935
GRAVY (calculated)
-0.341
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQSGDEDAG GPSWLKPLLR TVFFVPCKIH VDSSKSECNM YCLDCMEESL CSYCLSLHKD HRVVQIRRSS YHNVIRVSEV AKFIDISCVQ TYVINSAKIV
101: FLNGRPQPRP GKGVTNTCEI CCRSLLDSFR FCSLGCKLGG METDPALTFN LRPKPGRDSL YGLESDTSSS PRKLRKTSSA FSRRIEVPIS HLEDDATATS
201: RSISPGTPPI VSYRTSKRKG TPHRAPF
101: FLNGRPQPRP GKGVTNTCEI CCRSLLDSFR FCSLGCKLGG METDPALTFN LRPKPGRDSL YGLESDTSSS PRKLRKTSSA FSRRIEVPIS HLEDDATATS
201: RSISPGTPPI VSYRTSKRKG TPHRAPF
001: MIRTEEEEDY TSPPWLMPML RGSYFVPCSI HVDSNKNECN LFCLDCAGNA FCSYCLVKHK DHRVVQIRRS SYHNVVRVNE IQKFIDIACV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF
Arabidopsis Description
At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.