Factsheet for Bra012263.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01340	Canola	cytosol	99.5	84.98
Bra025865.1-P	Field mustard	cytosol	95.48	77.87
AT1G21000.1	Thale cress	cytosol	93.47	75.61
Bra016441.1-P	Field mustard	cytosol	91.96	75.31
Bra003715.1-P	Field mustard	nucleus	60.3	72.73
Bra015731.1-P	Field mustard	nucleus	81.41	68.07
GSMUA_Achr7P20650_001	Banana	cytosol	54.27	58.7
GSMUA_AchrUn_...	Banana	cytosol	58.79	57.92
GSMUA_Achr6P36360_001	Banana	cytosol	58.29	57.43
PGSC0003DMT400025721	Potato	plastid	49.25	56.32
GSMUA_Achr9P12280_001	Banana	cytosol	62.31	54.63
TraesCS7D01G390300.1	Wheat	cytosol	58.79	48.35
TraesCS7A01G394800.1	Wheat	cytosol	58.79	48.35
TraesCS7B01G296800.1	Wheat	cytosol	57.79	47.52
Os06t0624900-01	Rice	cytosol	60.3	47.43
HORVU7Hr1G093120.4	Barley	cytosol	56.28	46.86
OQU76729	Sorghum	cytosol, plastid	59.8	46.48
Bra035494.1-P	Field mustard	nucleus	49.75	45.21
Bra012632.1-P	Field mustard	nucleus	47.74	44.39
VIT_18s0122g00320.t01	Wine grape	cytosol	72.36	43.77
Bra021029.1-P	Field mustard	nucleus	48.74	43.3
Bra011992.1-P	Field mustard	nucleus	40.7	42.86
Bra013266.1-P	Field mustard	nucleus	48.74	42.73
Bra034379.1-P	Field mustard	nucleus	40.7	42.41
Bra025003.1-P	Field mustard	nucleus	45.23	39.82
Bra017531.1-P	Field mustard	nucleus	45.23	39.3
Bra022058.1-P	Field mustard	nucleus	44.22	38.43
Bra022055.1-P	Field mustard	nucleus	42.71	38.12
Bra023280.1-P	Field mustard	mitochondrion	50.75	35.69
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	30.15	25.0
Bra037203.1-P	Field mustard	cytosol	31.66	24.71
Bra014899.1-P	Field mustard	nucleus	30.15	24.39
Bra007550.1-P	Field mustard	extracellular, nucleus, vacuole	28.14	24.35
Bra014478.1-P	Field mustard	cytosol	29.65	23.79
Bra013149.1-P	Field mustard	cytosol	31.66	22.74
Bra023155.1-P	Field mustard	nucleus	20.6	12.62

Protein Annotations

EnsemblPlants:Bra012263.1	EnsemblPlants:Bra012263.1-P	EnsemblPlantsGene:Bra012263	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF12
PFAM:PF04640	SUPFAM:SSF57845	UniParc:UPI0002541528	UniProt:M4D703	MapMan:15.5.43	:

Description

AT1G21000 (E=3e-109) | zinc-binding family protein

Coordinates

chrA07:-:8991979..8992912

Molecular Weight (calculated)

22634.3 Da

IEP (calculated)

8.423

GRAVY (calculated)

-0.359

Length

199 amino acids

Sequence
(BLAST)

001: MIRIEEEEDY MSPPWLMPML RGSYFVPCSI HADSNKNECN LFCLDCAGTA FCSYCLVKHK DHRIVQIRRS SYHNVVRVNE IQKYIDITCV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMKRGDQSLT FSVRGKHGRE YQGGGSESDE ATTPTKMRKT NAFNRLMSGL SISTVRFDD

Best Arabidopsis Sequence Match ( AT1G21000.2 )
(BLAST)

001: MIRTEEEEDY TSPPWLMPML RGSYFVPCSI HVDSNKNECN LFCLDCAGNA FCSYCLVKHK DHRVVQIRRS SYHNVVRVNE IQKFIDIACV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF

Arabidopsis Description

At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.