Factsheet for Bra007550.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, extracellular

Predictor Summary:

nucleus 3
extracellular 2
endoplasmic reticulum 1
plasma membrane 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, nucleus, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41149	Canola	cytosol, extracellular, nucleus	99.13	99.13
CDX71792	Canola	cytosol	94.35	89.3
Bra014478.1-P	Field mustard	cytosol	87.83	81.45
AT3G60670.1	Thale cress	cytosol	81.74	76.73
VIT_00s0233g00100.t01	Wine grape	cytosol	38.26	64.71
VIT_15s0048g00580.t01	Wine grape	nucleus	56.09	51.6
KRG88921	Soybean	nucleus	53.48	50.83
VIT_02s0154g00150.t01	Wine grape	nucleus	51.74	48.77
GSMUA_Achr11P...	Banana	cytosol	47.83	47.21
KRH75326	Soybean	extracellular, plasma membrane	54.35	45.13
Solyc01g091000.2.1	Tomato	cytosol, nucleus, plasma membrane	47.83	44.0
Bra037203.1-P	Field mustard	cytosol	43.48	39.22
KRH28037	Soybean	cytosol, nucleus, plastid	40.87	38.68
Bra013149.1-P	Field mustard	cytosol	46.52	38.63
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	39.57	37.92
Bra014899.1-P	Field mustard	nucleus	38.7	36.18
Bra034379.1-P	Field mustard	nucleus	28.26	34.03
Bra012632.1-P	Field mustard	nucleus	31.3	33.64
Bra003715.1-P	Field mustard	nucleus	23.91	33.33
Bra011992.1-P	Field mustard	nucleus	26.52	32.28
Bra035494.1-P	Field mustard	nucleus	30.43	31.96
Bra022055.1-P	Field mustard	nucleus	30.87	31.84
Bra013266.1-P	Field mustard	nucleus	31.3	31.72
Bra021029.1-P	Field mustard	nucleus	30.43	31.25
Bra017531.1-P	Field mustard	nucleus	30.43	30.57
Bra022058.1-P	Field mustard	nucleus	29.57	29.69
Bra025003.1-P	Field mustard	nucleus	29.13	29.65
Bra012263.1-P	Field mustard	cytosol	24.35	28.14
Bra015731.1-P	Field mustard	nucleus	28.7	27.73
Bra025865.1-P	Field mustard	cytosol	28.26	26.64
Bra016441.1-P	Field mustard	cytosol	27.83	26.34
Bra023280.1-P	Field mustard	mitochondrion	31.3	25.44
Bra023155.1-P	Field mustard	nucleus	29.57	20.92

Protein Annotations

EnsemblPlants:Bra007550.1	EnsemblPlants:Bra007550.1-P	EnsemblPlantsGene:Bra007550	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF1
PFAM:PF04640	UniParc:UPI00025428C6	UniProt:M4CTK6	MapMan:15.5.43	:	:

Description

AT3G60670 (E=7e-079) | zinc-binding protein, putative

Coordinates

chrA09:-:29750920..29752144

Molecular Weight (calculated)

26187.7 Da

IEP (calculated)

8.389

GRAVY (calculated)

-0.202

Length

230 amino acids

Sequence
(BLAST)

001: MGLALILQME TREFPAWLEV LLKEKFFNAC LDHEEEKKNE KNILCIDCCL SICPHCLPSH TSHRLLRIRR YMYNDVLRVE DGSNLMDCSL IQPYIVNSSK
101: VVFINERPHS RQFRGSGNFC NTCDRSLQSP YLFCSLSCKI SDVIMRQRGL SGFLRVCISL NLTDDEGGVD MFLCQALACT AATEIVRKKR SSLSSTCRRV
201: TTAVSSANTE APANFFNRRK NTPPQRAPLY

Best Arabidopsis Sequence Match ( AT3G60670.1 )
(BLAST)

001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY

Arabidopsis Description

At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.