Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75326 | Soybean | extracellular, plasma membrane | 94.21 | 82.31 |
| VIT_15s0048g00580.t01 | Wine grape | nucleus | 75.62 | 73.2 |
| Solyc01g091000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 65.29 | 63.2 |
| GSMUA_Achr11P... | Banana | cytosol | 55.79 | 57.94 |
| AT3G60670.1 | Thale cress | cytosol | 54.96 | 54.29 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 51.24 | 53.91 |
| CDX71792 | Canola | cytosol | 54.13 | 53.91 |
| Bra007550.1-P | Field mustard | extracellular, nucleus, vacuole | 50.83 | 53.48 |
| CDY48369 | Canola | cytosol | 54.96 | 53.41 |
| Bra014478.1-P | Field mustard | cytosol | 54.13 | 52.82 |
| CDX89067 | Canola | cytosol | 54.13 | 52.82 |
| KRH42391 | Soybean | nucleus | 39.67 | 48.0 |
| KRH58510 | Soybean | nucleus | 39.26 | 47.74 |
| KRH37851 | Soybean | nucleus | 47.11 | 47.7 |
| KRH20236 | Soybean | nucleus | 48.35 | 47.37 |
| KRH12861 | Soybean | nucleus | 46.69 | 47.28 |
| KRH03576 | Soybean | nucleus | 48.35 | 47.18 |
| KRH28037 | Soybean | cytosol, nucleus, plastid | 45.04 | 44.86 |
| KRH37216 | Soybean | cytosol | 46.28 | 43.41 |
| KRH12195 | Soybean | cytosol | 44.63 | 42.35 |
| KRH75604 | Soybean | nucleus | 33.47 | 38.57 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 33.06 | 35.87 |
| KRH24008 | Soybean | cytosol | 32.64 | 35.43 |
| KRH19979 | Soybean | cytosol | 30.17 | 34.93 |
| KRH39550 | Soybean | nucleus | 33.47 | 34.32 |
| KRH74408 | Soybean | nucleus | 33.47 | 34.32 |
| KRG96080 | Soybean | cytosol | 30.99 | 34.25 |
| KRH32606 | Soybean | extracellular | 30.99 | 33.78 |
| KRH27687 | Soybean | cytosol | 32.23 | 33.48 |
| KRH72960 | Soybean | nucleus | 13.64 | 32.67 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 29.75 | 32.58 |
| KRH77790 | Soybean | nucleus | 32.64 | 31.47 |
| KRH25132 | Soybean | cytosol | 28.51 | 31.36 |
| KRH13451 | Soybean | cytosol | 12.4 | 30.61 |
| KRH30543 | Soybean | nucleus | 21.9 | 29.44 |
| KRH49692 | Soybean | nucleus | 24.79 | 26.67 |
| KRH45433 | Soybean | plastid | 24.38 | 25.21 |
| KRH41746 | Soybean | nucleus | 23.55 | 23.95 |
| KRH60448 | Soybean | nucleus | 23.14 | 23.53 |
Protein Annotations
| EnsemblPlants:KRG88921 | EnsemblPlantsGene:GLYMA_U013300 | EntrezGene:100797977 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF1 | PFAM:PF04640 | PFscan:PS50119 | ProteinID:KRG88919.1 | ProteinID:KRG88920.1 |
| ProteinID:KRG88921 | ProteinID:KRG88921.1 | UniParc:UPI00023CCF5D | UniProt:K7LQ09 | MapMan:15.5.43 | : |
Description
hypothetical protein
Coordinates
chrscaffold_21:-:851641..853980
Molecular Weight (calculated)
27247.8 Da
IEP (calculated)
8.396
GRAVY (calculated)
-0.251
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MFVSSSSHVP RWLQVLLTEK FYNVCIIHEE AKKNEKNVYC LDCCISLCPH CLSPHRSHRL LQIRRYVYHD VIRLDDAAKL IDCNSVQSYT TNSAKVVFLN
101: QRPQTRNFRG SGNFCSTCDR SLQDPYHFCS LSCKINYLVR TTDSLCGYLF ECNYLPLLES GLDDGLMMTP DSVLEPSGSG GYGGVDCRTT LACTATTEIV
201: RKKRTGGAAF RLPFRPACSP VSEISACLMN RRKGNPQRAP LH
101: QRPQTRNFRG SGNFCSTCDR SLQDPYHFCS LSCKINYLVR TTDSLCGYLF ECNYLPLLES GLDDGLMMTP DSVLEPSGSG GYGGVDCRTT LACTATTEIV
201: RKKRTGGAAF RLPFRPACSP VSEISACLMN RRKGNPQRAP LH
001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
Arabidopsis Description
At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.