CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24008	Soybean	cytosol	95.07	95.07
KRH27687	Soybean	cytosol	82.96	79.4
KRH75604	Soybean	nucleus	71.3	75.71
KRH77790	Soybean	nucleus	83.41	74.1
VIT_16s0039g01560.t01	Wine grape	nucleus	75.34	72.73
KRH74408	Soybean	nucleus	72.2	68.22
KRH39550	Soybean	nucleus	71.3	67.37
KRH13451	Soybean	cytosol	27.35	62.24
TraesCS2A01G448300.1	Wheat	cytosol	65.92	59.76
TraesCS2D01G447400.1	Wheat	cytosol	65.92	59.76
TraesCS6B01G291400.1	Wheat	nucleus	65.92	59.27
TraesCS2B01G469000.1	Wheat	cytosol	65.02	58.94
TraesCS6D01G250500.1	Wheat	nucleus	65.47	58.63
Os04t0591100-01	Rice	nucleus	65.02	58.23
Os02t0692700-01	Rice	nucleus	66.37	57.59
EES12755	Sorghum	nucleus	64.57	57.37
Zm00001d017682_P001	Maize	nucleus	63.68	56.35
KXG30975	Sorghum	nucleus	63.68	56.35
Zm00001d002489_P001	Maize	nucleus	62.78	54.69
Zm00001d026047_P002	Maize	nucleus	61.88	54.55
Zm00001d051511_P001	Maize	nucleus	60.54	53.78
TraesCS6A01G264400.2	Wheat	nucleus	65.92	53.45
KRH19979	Soybean	cytosol	47.53	50.72
KRH45433	Soybean	plastid	52.02	49.57
KRH32606	Soybean	extracellular	47.98	48.2
KRH67792	Soybean	cytosol, nucleus, plasma membrane	47.09	47.51
KRG96080	Soybean	cytosol	46.64	47.49
KRH25132	Soybean	cytosol	45.29	45.91
KRH30543	Soybean	nucleus	33.63	41.67
HORVU6Hr1G067060.3	Barley	nucleus, plastid	55.61	38.63
KRH58510	Soybean	nucleus	31.84	35.68
KRH42391	Soybean	nucleus	31.84	35.5
KRG88921	Soybean	nucleus	35.87	33.06
KRH12861	Soybean	nucleus	34.08	31.8
KRH37216	Soybean	cytosol	36.32	31.4
KRH37851	Soybean	nucleus	33.63	31.38
KRH12195	Soybean	cytosol	35.87	31.37
KRH20236	Soybean	nucleus	33.18	29.96
KRH03576	Soybean	nucleus	33.18	29.84
KRH75326	Soybean	extracellular, plasma membrane	36.77	29.6
KRH49692	Soybean	nucleus	28.25	28.0
KRH60448	Soybean	nucleus	29.6	27.73
KRH41746	Soybean	nucleus	29.6	27.73
KRH72960	Soybean	nucleus	12.56	27.72
KRH28037	Soybean	cytosol, nucleus, plastid	29.15	26.75

Protein Annotations

EMBL:ACUP02006797	EnsemblPlants:KRH29309	EnsemblPlantsGene:GLYMA_11G109100	EntrezGene:100810888	InterPro:DUF597	PANTHER:PTHR31065
PANTHER:PTHR31065:SF8	PFAM:PF04640	ProteinID:KRH29309	ProteinID:KRH29309.1	SEG:seg	UniParc:UPI000233CB2C
UniProt:I1LJ36	MapMan:15.5.43	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:8322727..8324868

Molecular Weight (calculated)

25116.3 Da

IEP (calculated)

9.525

GRAVY (calculated)

-0.498

Length

223 amino acids

Sequence
(BLAST)

001: MVGGFNGEGV VREKEEEEEN NKWPSWLQPL LKTRFFVQCK VHADSHKSEC NMYCLDCVNG ALCSACLSSH KEHRIIQIRR SSYHDVIRVS EIQKFLDITG
101: VQTYIINSAK IVFLNERPQP RPGKGVTNTC QVCERSLLDS FNFCSLGCKI VGTSKKFRNK KMLGEADGEE SVNGIRNNAS ARKKIHSFTP STPPPTVVNY
201: RTAKRRKGIP HRAPMGGGLI IEY

Best Arabidopsis Sequence Match ( AT1G21000.1 )
(BLAST)

001: MGPMIRTEEE EDYTSPPWLM PMLRGSYFVP CSIHVDSNKN ECNLFCLDCA GNAFCSYCLV KHKDHRVVQI RRSSYHNVVR VNEIQKFIDI ACVQTYIINS
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF

Arabidopsis Description

At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.