Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G250500.1 | Wheat | nucleus | 97.98 | 97.59 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 96.77 | 87.27 |
| Os02t0692700-01 | Rice | nucleus | 87.5 | 84.44 |
| KXG30975 | Sorghum | nucleus | 85.08 | 83.73 |
| Zm00001d051511_P001 | Maize | nucleus | 79.44 | 78.49 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 76.61 | 77.24 |
| KRH75604 | Soybean | nucleus | 64.92 | 76.67 |
| KRH74408 | Soybean | nucleus | 68.15 | 71.61 |
| PGSC0003DMT400045164 | Potato | nucleus | 64.92 | 70.93 |
| KRH39550 | Soybean | nucleus | 67.34 | 70.76 |
| Solyc08g076860.2.1 | Tomato | nucleus | 64.52 | 70.18 |
| AT1G32700.1 | Thale cress | cytosol | 58.87 | 68.54 |
| Solyc06g061240.2.1 | Tomato | nucleus | 60.48 | 66.96 |
| CDY01500 | Canola | nucleus | 57.66 | 66.82 |
| KRH24008 | Soybean | cytosol | 60.08 | 66.82 |
| PGSC0003DMT400019836 | Potato | nucleus | 60.08 | 66.82 |
| Bra035494.1-P | Field mustard | nucleus | 58.87 | 66.67 |
| PGSC0003DMT400046007 | Potato | cytosol | 60.08 | 66.52 |
| Bra012632.1-P | Field mustard | nucleus | 57.26 | 66.36 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 59.27 | 65.92 |
| CDX90437 | Canola | nucleus | 56.85 | 65.89 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 61.29 | 65.8 |
| KRH27687 | Soybean | cytosol | 61.29 | 65.24 |
| AT4G17900.1 | Thale cress | nucleus | 59.68 | 65.2 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 68.15 | 64.5 |
| Solyc08g005100.2.1 | Tomato | cytosol | 57.66 | 63.84 |
| CDY08880 | Canola | nucleus | 57.66 | 63.84 |
| CDY44504 | Canola | nucleus | 58.06 | 63.44 |
| CDX78810 | Canola | nucleus | 58.06 | 63.44 |
| Bra021029.1-P | Field mustard | nucleus | 57.26 | 63.39 |
| CDX76551 | Canola | nucleus | 57.26 | 63.39 |
| Bra013266.1-P | Field mustard | nucleus | 56.85 | 62.11 |
| KRH77790 | Soybean | nucleus | 62.5 | 61.75 |
| Bra017531.1-P | Field mustard | nucleus | 54.44 | 58.95 |
| CDY35177 | Canola | nucleus | 54.44 | 58.95 |
| CDY69910 | Canola | nucleus | 53.63 | 58.85 |
| CDY69918 | Canola | nucleus | 53.23 | 58.41 |
| CDY03199 | Canola | nucleus | 52.42 | 57.78 |
| Bra025003.1-P | Field mustard | nucleus | 52.42 | 57.52 |
| Bra022055.1-P | Field mustard | nucleus | 49.6 | 55.16 |
| CDY66745 | Canola | nucleus | 49.6 | 55.16 |
| CDX87686 | Canola | nucleus | 51.21 | 54.98 |
| CDY72135 | Canola | cytosol, nucleus | 47.58 | 54.88 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 56.05 | 54.09 |
| Bra022058.1-P | Field mustard | nucleus | 49.6 | 53.71 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 60.08 | 52.46 |
| CDX87684 | Canola | nucleus | 49.6 | 52.34 |
| Bra023280.1-P | Field mustard | mitochondrion | 59.68 | 52.3 |
| AT5G46710.1 | Thale cress | nucleus | 47.58 | 52.21 |
| CDY44664 | Canola | plasma membrane | 60.08 | 50.68 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 45.97 | 47.11 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 57.66 | 44.55 |
| TraesCS6B01G196100.1 | Wheat | cytosol, mitochondrion | 35.89 | 42.18 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 36.29 | 41.86 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 36.29 | 41.86 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 36.29 | 41.67 |
| TraesCS2B01G524600.1 | Wheat | mitochondrion | 26.21 | 40.37 |
| TraesCS1B01G086700.1 | Wheat | cytosol, nucleus, plastid | 39.52 | 38.13 |
| TraesCS7B01G180100.1 | Wheat | cytosol | 38.31 | 35.58 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 51.21 | 34.89 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 29.03 | 30.38 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 24.19 | 30.3 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 29.84 | 28.91 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G291400.1 | EnsemblPlantsGene:TraesCS6B01G291400 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:524063395..524065016
Molecular Weight (calculated)
27000.0 Da
IEP (calculated)
9.727
GRAVY (calculated)
-0.516
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHASPLA LKSGGATGGA GRDEEAENQR WPPWLKPLLA TSFFVQCRAH ADAHKSECNM YCLDCINGAL CSLCLAHHRD HHAIQIRRSS YHDVIRVSEI
101: QRVLDITGVQ TYIINSARVV FLNERPQPRP GKGVTNTCEV CERSLLDSFR FCSLGCKIVG TSGGHRPRKK HGGVDGGKKK KRAAVKEARS DSEHSCTSTS
201: GGSSDKSSVV QSFSPSTPPA TSSSYRAGNK RRKGIPHRSP FGSLIVEY
101: QRVLDITGVQ TYIINSARVV FLNERPQPRP GKGVTNTCEV CERSLLDSFR FCSLGCKIVG TSGGHRPRKK HGGVDGGKKK KRAAVKEARS DSEHSCTSTS
201: GGSSDKSSVV QSFSPSTPPA TSSSYRAGNK RRKGIPHRSP FGSLIVEY
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.