Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G291400.1 | Wheat | nucleus | 84.44 | 87.5 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 84.05 | 86.75 |
| KXG30975 | Sorghum | nucleus | 84.82 | 86.51 |
| Zm00001d017682_P001 | Maize | nucleus | 82.1 | 83.73 |
| Os04t0591100-01 | Rice | nucleus | 77.04 | 79.52 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 84.05 | 78.55 |
| KRH75604 | Soybean | nucleus | 63.03 | 77.14 |
| KRH74408 | Soybean | nucleus | 66.93 | 72.88 |
| PGSC0003DMT400045164 | Potato | nucleus | 63.81 | 72.25 |
| KRH39550 | Soybean | nucleus | 66.15 | 72.03 |
| Solyc08g076860.2.1 | Tomato | nucleus | 63.42 | 71.49 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 62.26 | 69.26 |
| AT1G32700.1 | Thale cress | cytosol | 56.42 | 68.08 |
| Solyc06g061240.2.1 | Tomato | nucleus | 59.14 | 67.86 |
| CDY01500 | Canola | nucleus | 56.42 | 67.76 |
| PGSC0003DMT400019836 | Potato | nucleus | 58.75 | 67.71 |
| Bra012632.1-P | Field mustard | nucleus | 56.03 | 67.29 |
| PGSC0003DMT400046007 | Potato | cytosol | 58.37 | 66.96 |
| CDX90437 | Canola | nucleus | 55.64 | 66.82 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 57.59 | 66.37 |
| Bra035494.1-P | Field mustard | nucleus | 56.42 | 66.21 |
| KRH27687 | Soybean | cytosol | 59.92 | 66.09 |
| KRH24008 | Soybean | cytosol | 57.2 | 65.92 |
| CDY44504 | Canola | nucleus | 57.98 | 65.64 |
| AT4G17900.1 | Thale cress | nucleus | 57.98 | 65.64 |
| CDX78810 | Canola | nucleus | 57.2 | 64.76 |
| Bra013266.1-P | Field mustard | nucleus | 56.81 | 64.32 |
| CDY08880 | Canola | nucleus | 56.03 | 64.29 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 65.37 | 64.12 |
| CDX76551 | Canola | nucleus | 55.64 | 63.84 |
| Solyc08g005100.2.1 | Tomato | cytosol | 55.64 | 63.84 |
| Bra021029.1-P | Field mustard | nucleus | 55.64 | 63.84 |
| KRH77790 | Soybean | nucleus | 60.7 | 62.15 |
| CDY35177 | Canola | nucleus | 53.7 | 60.26 |
| Bra017531.1-P | Field mustard | nucleus | 53.31 | 59.83 |
| CDY69910 | Canola | nucleus | 52.53 | 59.73 |
| CDY69918 | Canola | nucleus | 52.14 | 59.29 |
| CDY03199 | Canola | nucleus | 51.75 | 59.11 |
| Bra025003.1-P | Field mustard | nucleus | 51.36 | 58.41 |
| Os10t0574700-01 | Rice | nucleus | 56.81 | 57.48 |
| Bra022055.1-P | Field mustard | nucleus | 48.25 | 55.61 |
| CDY66745 | Canola | nucleus | 48.25 | 55.61 |
| CDX87686 | Canola | nucleus | 49.03 | 54.55 |
| CDY72135 | Canola | cytosol, nucleus | 45.53 | 54.42 |
| AT5G46710.1 | Thale cress | nucleus | 47.08 | 53.54 |
| Bra022058.1-P | Field mustard | nucleus | 47.47 | 53.28 |
| CDX87684 | Canola | nucleus | 47.86 | 52.34 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 57.59 | 52.11 |
| Bra023280.1-P | Field mustard | mitochondrion | 57.2 | 51.94 |
| CDY44664 | Canola | plasma membrane | 57.59 | 50.34 |
| Os01t0517800-01 | Rice | extracellular | 31.52 | 47.37 |
| Os06t0624900-01 | Rice | cytosol | 45.14 | 45.85 |
| Os08t0560300-01 | Rice | cytosol | 35.41 | 45.5 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 54.86 | 43.93 |
| Os11t0428700-00 | Rice | cytosol | 21.4 | 41.98 |
| Os01t0518000-01 | Rice | cytosol | 33.85 | 40.09 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 50.19 | 35.44 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 29.57 | 32.07 |
| Os02t0172800-01 | Rice | cytosol | 28.79 | 30.71 |
| Os06t0666100-01 | Rice | nucleus | 28.79 | 28.35 |
| Os02t0661400-00 | Rice | cytosol | 24.51 | 27.88 |
Protein Annotations
| EMBL:AK066953 | EMBL:AK104818 | EMBL:HQ858812 | EnsemblPlants:Os02t0692700-01 | EnsemblPlantsGene:Os02g0692700 | EntrezGene:4330385 |
| InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 | PFAM:PF04640 | ProteinID:BAD07695.1 | ProteinID:BAD07895.1 |
| ProteinID:BAS80386.1 | ProteinID:EAZ24249.1 | RefSeq:XP_015622656.1 | SEG:seg | UniParc:UPI000023679F | UniProt:Q6Z8A4 |
| MapMan:15.5.43 | : | : | : | : | : |
Description
Similar to PLATZ transcription factor. (Os02t0692700-01)
Coordinates
chr2:-:28435079..28436672
Molecular Weight (calculated)
28253.6 Da
IEP (calculated)
9.349
GRAVY (calculated)
-0.592
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHASPFS LKNRGDMGGR GYEEEEVENQ RWPPWLKPLL STSFFVQCRI HADAHKSECN MYCLDCMNGA LCSLCLSHHR DHHAIQIRRS SYHDVIRVSE
101: IQKVLDITGV QTYIINSARV VFLNERPQPR PGKGVTNTCE VCERSLLDSF RFCSLGCKIV GTSGGYRPRK KHGGCGGGGG GGDGGKKKKK RAALKDARYE
201: SEDSCTSTSG GSSDKSSVVQ SFTPLTPPPT SASYRTGNKR RKGVPHRSPF GSLIVEF
101: IQKVLDITGV QTYIINSARV VFLNERPQPR PGKGVTNTCE VCERSLLDSF RFCSLGCKIV GTSGGYRPRK KHGGCGGGGG GGDGGKKKKK RAALKDARYE
201: SEDSCTSTSG GSSDKSSVVQ SFTPLTPPPT SASYRTGNKR RKGVPHRSPF GSLIVEF
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.