Factsheet for Bra035494.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G32700.1	Thale cress	cytosol	88.58	91.08
CDX84082	Canola	cytosol, endoplasmic reticulum, vacuole	98.17	75.7
KRH75604	Soybean	nucleus	72.15	75.24
CDY44664	Canola	plasma membrane	98.63	73.47
PGSC0003DMT400045164	Potato	nucleus	72.6	70.04
KRH74408	Soybean	nucleus	74.89	69.49
Solyc08g076860.2.1	Tomato	nucleus	72.15	69.3
Bra023280.1-P	Field mustard	mitochondrion	89.5	69.26
PGSC0003DMT400046007	Potato	cytosol	70.78	69.2
KRH39550	Soybean	nucleus	74.43	69.07
PGSC0003DMT400019836	Potato	nucleus	69.41	68.16
Solyc06g061240.2.1	Tomato	nucleus	68.95	67.41
Solyc08g005100.2.1	Tomato	cytosol	68.04	66.52
Bra021029.1-P	Field mustard	nucleus	67.58	66.07
Bra012632.1-P	Field mustard	nucleus	64.38	65.89
Bra013266.1-P	Field mustard	nucleus	65.75	63.44
VIT_02s0012g01400.t01	Wine grape	nucleus	73.52	61.45
TraesCS6B01G291400.1	Wheat	nucleus	66.67	58.87
Os04t0591100-01	Rice	nucleus	66.67	58.63
TraesCS2A01G448300.1	Wheat	cytosol	65.75	58.54
TraesCS2B01G469000.1	Wheat	cytosol	65.75	58.54
TraesCS2D01G447400.1	Wheat	cytosol	65.75	58.54
TraesCS6D01G250500.1	Wheat	nucleus	66.21	58.23
Bra017531.1-P	Field mustard	nucleus	60.27	57.64
EES12755	Sorghum	nucleus	65.3	56.97
Bra003715.1-P	Field mustard	nucleus	42.92	56.97
Os02t0692700-01	Rice	nucleus	66.21	56.42
Zm00001d002489_P001	Maize	nucleus	65.3	55.86
KXG30975	Sorghum	nucleus	63.93	55.56
Zm00001d026047_P002	Maize	nucleus	63.47	54.94
Bra025003.1-P	Field mustard	nucleus	56.62	54.87
Zm00001d017682_P001	Maize	nucleus	63.01	54.76
Zm00001d051511_P001	Maize	nucleus	61.19	53.39
Bra022055.1-P	Field mustard	nucleus	53.88	52.91
TraesCS6A01G264400.2	Wheat	nucleus	66.21	52.73
Bra034379.1-P	Field mustard	nucleus	43.84	50.26
Bra022058.1-P	Field mustard	nucleus	52.51	50.22
Bra012263.1-P	Field mustard	cytosol	45.21	49.75
Bra015731.1-P	Field mustard	nucleus	53.88	49.58
Bra016441.1-P	Field mustard	cytosol	52.97	47.74
Bra011992.1-P	Field mustard	nucleus	41.1	47.62
Bra025865.1-P	Field mustard	cytosol	52.97	47.54
HORVU6Hr1G067060.3	Barley	nucleus, plastid	55.71	38.01
Bra037203.1-P	Field mustard	cytosol	36.07	30.98
Bra007550.1-P	Field mustard	extracellular, nucleus, vacuole	31.96	30.43
Bra014478.1-P	Field mustard	cytosol	34.25	30.24
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	32.88	30.0
Bra014899.1-P	Field mustard	nucleus	33.33	29.67
Bra013149.1-P	Field mustard	cytosol	35.62	28.16
Bra023155.1-P	Field mustard	nucleus	24.2	16.31

Protein Annotations

EnsemblPlants:Bra035494.1	EnsemblPlants:Bra035494.1-P	EnsemblPlantsGene:Bra035494	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF8
PFAM:PF04640	SEG:seg	UniParc:UPI000254619C	UniProt:M4F344	MapMan:15.5.43	:

Description

AT1G32700 (E=9e-105) | zinc-binding family protein

Coordinates

chrA08:+:7813260..7815325

Molecular Weight (calculated)

24892.7 Da

IEP (calculated)

9.462

GRAVY (calculated)

-0.548

Length

219 amino acids

Sequence
(BLAST)

001: MGAEEENSKS WPPWLKPLLQ EKFFVQCKLH AYSHKSECNM YCLDCTNGPL CSFCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVVNTCQV CYRSLVDSFR FCSLGCKISG TSKNFDKKRK DWTNNLSDSD DSYSSTTTSN GRLKKNTDMI NNNSFTPSTP PLSAVNGRIV
201: KRRKGIPHRA PFGGLIIEY

Best Arabidopsis Sequence Match ( AT1G32700.1 )
(BLAST)

001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.