Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G291400.1 | Wheat | nucleus | 97.59 | 97.98 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 95.58 | 86.55 |
| Os02t0692700-01 | Rice | nucleus | 86.75 | 84.05 |
| KXG30975 | Sorghum | nucleus | 84.74 | 83.73 |
| Zm00001d051511_P001 | Maize | nucleus | 79.92 | 79.28 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 75.5 | 76.42 |
| KRH75604 | Soybean | nucleus | 64.26 | 76.19 |
| KRH74408 | Soybean | nucleus | 67.47 | 71.19 |
| PGSC0003DMT400045164 | Potato | nucleus | 64.26 | 70.48 |
| KRH39550 | Soybean | nucleus | 66.67 | 70.34 |
| Solyc08g076860.2.1 | Tomato | nucleus | 64.26 | 70.18 |
| AT1G32700.1 | Thale cress | cytosol | 58.23 | 68.08 |
| Solyc06g061240.2.1 | Tomato | nucleus | 60.64 | 67.41 |
| PGSC0003DMT400019836 | Potato | nucleus | 60.24 | 67.26 |
| CDY01500 | Canola | nucleus | 57.43 | 66.82 |
| PGSC0003DMT400046007 | Potato | cytosol | 59.84 | 66.52 |
| KRH24008 | Soybean | cytosol | 59.44 | 66.37 |
| Bra012632.1-P | Field mustard | nucleus | 57.03 | 66.36 |
| Bra035494.1-P | Field mustard | nucleus | 58.23 | 66.21 |
| CDX90437 | Canola | nucleus | 56.63 | 65.89 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 58.63 | 65.47 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 60.64 | 65.37 |
| KRH27687 | Soybean | cytosol | 60.64 | 64.81 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 67.87 | 64.5 |
| AT4G17900.1 | Thale cress | nucleus | 58.63 | 64.32 |
| CDY44504 | Canola | nucleus | 58.23 | 63.88 |
| CDX78810 | Canola | nucleus | 58.23 | 63.88 |
| Solyc08g005100.2.1 | Tomato | cytosol | 57.43 | 63.84 |
| CDY08880 | Canola | nucleus | 57.03 | 63.39 |
| Bra021029.1-P | Field mustard | nucleus | 56.63 | 62.95 |
| CDX76551 | Canola | nucleus | 56.63 | 62.95 |
| Bra013266.1-P | Field mustard | nucleus | 57.03 | 62.56 |
| KRH77790 | Soybean | nucleus | 61.85 | 61.35 |
| Bra017531.1-P | Field mustard | nucleus | 53.82 | 58.52 |
| CDY35177 | Canola | nucleus | 53.82 | 58.52 |
| CDY69910 | Canola | nucleus | 53.01 | 58.41 |
| CDY69918 | Canola | nucleus | 52.61 | 57.96 |
| CDY03199 | Canola | nucleus | 51.81 | 57.33 |
| Bra025003.1-P | Field mustard | nucleus | 51.81 | 57.08 |
| CDY66745 | Canola | nucleus | 49.0 | 54.71 |
| Bra022055.1-P | Field mustard | nucleus | 49.0 | 54.71 |
| CDX87686 | Canola | nucleus | 50.6 | 54.55 |
| CDY72135 | Canola | cytosol, nucleus | 46.99 | 54.42 |
| Bra022058.1-P | Field mustard | nucleus | 49.0 | 53.28 |
| AT5G46710.1 | Thale cress | nucleus | 47.39 | 52.21 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 59.44 | 52.11 |
| Bra023280.1-P | Field mustard | mitochondrion | 59.04 | 51.94 |
| CDX87684 | Canola | nucleus | 49.0 | 51.91 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 55.02 | 51.5 |
| CDY44664 | Canola | plasma membrane | 59.44 | 50.34 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 45.78 | 47.11 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 57.03 | 44.24 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 36.14 | 41.86 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 36.14 | 41.86 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 35.34 | 41.71 |
| TraesCS6D01G157500.1 | Wheat | cytosol | 34.14 | 38.81 |
| TraesCS1D01G069600.1 | Wheat | cytosol, nucleus, plastid | 38.55 | 38.4 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 31.73 | 36.07 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 28.11 | 35.9 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 38.15 | 35.71 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 51.0 | 34.89 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 28.92 | 30.38 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 24.5 | 30.05 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 29.32 | 30.04 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 30.52 | 29.92 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G250500.1 | EnsemblPlantsGene:TraesCS6D01G250500 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:354222978..354224617
Molecular Weight (calculated)
26883.9 Da
IEP (calculated)
9.904
GRAVY (calculated)
-0.470
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHASPLA LKSGGAATGG AGRDEEAGNQ RWPPWLKPLL ATSFFVQCRA HADAHKSECN MYCLDCINGA LCSLCLAHHR DHHAIQIRRS SYHDVIRVSE
101: IQRVLDITGV QTYIINSARV VFLNERPQPR PGKGVTNTCE VCERSLLDSF RFCSLGCKIV GTSGGHRPRK KHGGVGGGGK KKRAAVKDAR SDSEHSCTST
201: SGGSSDRSSV VQSFSPSTPP ATSSSYRAGN KRRKGIPHRS PFGSLIVEY
101: IQRVLDITGV QTYIINSARV VFLNERPQPR PGKGVTNTCE VCERSLLDSF RFCSLGCKIV GTSGGHRPRK KHGGVGGGGK KKRAAVKDAR SDSEHSCTST
201: SGGSSDRSSV VQSFSPSTPP ATSSSYRAGN KRRKGIPHRS PFGSLIVEY
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.