Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G168400.1 | Wheat | cytosol | 88.58 | 90.23 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 76.71 | 79.62 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 53.88 | 53.88 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 46.58 | 52.31 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 37.44 | 38.14 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 41.55 | 37.6 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 35.62 | 36.28 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 38.81 | 34.55 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 38.81 | 34.14 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 39.27 | 32.33 |
| OQU84555 | Sorghum | cytosol | 19.18 | 31.82 |
| KXG29686 | Sorghum | cytosol | 27.4 | 31.41 |
| EES04679 | Sorghum | cytosol | 26.48 | 30.21 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 36.07 | 29.7 |
| Zm00001d015868_P001 | Maize | nucleus | 28.77 | 29.3 |
| TraesCS1D01G069600.1 | Wheat | cytosol, nucleus, plastid | 33.33 | 29.2 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 29.68 | 27.43 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 24.66 | 26.6 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 28.77 | 25.93 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 29.22 | 25.2 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G157500.1 | EnsemblPlantsGene:TraesCS6D01G157500 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF31 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr6D:+:133581340..133583526
Molecular Weight (calculated)
24431.8 Da
IEP (calculated)
5.586
GRAVY (calculated)
-0.444
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNMRFGHEA AAAAEGRTPA WLGPLLGAEF YKPCATHPYQ VKNECNHYCL DCAGVDDAIC CTQCVSAHRN HHIVQIRKSS YHEVIQLAEL KAVADVSQVQ
101: TYVINYDRVV FLNRRPQAPQ DGVKCIGPAG ACLECGWGLV DTNFLFCSLS CKLDGMVSDP NITFIVDPRR NREDPGLETE EDDEDEGDDG LPGSSNRPPG
201: WISYRRRPRK GIPERAPFY
101: TYVINYDRVV FLNRRPQAPQ DGVKCIGPAG ACLECGWGLV DTNFLFCSLS CKLDGMVSDP NITFIVDPRR NREDPGLETE EDDEDEGDDG LPGSSNRPPG
201: WISYRRRPRK GIPERAPFY
001: MVSSIVKMEN DDVMTPPWLT PMLRADYFVT CSIHSQSSKS ECNLFCLDCS GNAFCSSCLA HHRTHRVIQI RRSSYHNVVR VSEIQKHIDI SCIQTYVINS
101: AKIFFLNARP QCRTGKSLNK TCQICSRNLL DSFLFCSLAC KLEGVKNGED PNLTLFHSGK SDDSSKIINT GICSRLIDGI SIAVDDQRSE TAGVLSPETP
201: SIESHRNYPM KSRRKGIPQR APF
101: AKIFFLNARP QCRTGKSLNK TCQICSRNLL DSFLFCSLAC KLEGVKNGED PNLTLFHSGK SDDSSKIINT GICSRLIDGI SIAVDDQRSE TAGVLSPETP
201: SIESHRNYPM KSRRKGIPQR APF
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT1G43000]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.