Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G381500.1 | Wheat | nucleus | 98.03 | 97.27 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 97.24 | 96.86 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 88.58 | 88.58 |
| EER90181 | Sorghum | cytosol | 76.77 | 78.95 |
| Os06t0666100-01 | Rice | nucleus | 79.13 | 77.01 |
| Zm00001d046958_P001 | Maize | nucleus | 75.2 | 76.4 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 72.44 | 75.72 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 64.57 | 72.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 62.99 | 71.75 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 61.42 | 64.2 |
| CDX98234 | Canola | cytosol | 40.55 | 59.88 |
| Solyc02g068510.1.1 | Tomato | cytosol | 53.54 | 56.43 |
| KRH42391 | Soybean | nucleus | 43.31 | 55.0 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 55.91 | 54.41 |
| KRH58510 | Soybean | nucleus | 41.34 | 52.76 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 49.21 | 52.08 |
| CDY12444 | Canola | nucleus | 49.21 | 52.08 |
| AT1G31040.1 | Thale cress | nucleus | 49.61 | 51.85 |
| CDY27171 | Canola | nucleus | 48.82 | 51.67 |
| Bra014899.1-P | Field mustard | nucleus | 49.61 | 51.22 |
| CDY02353 | Canola | mitochondrion, nucleus | 37.01 | 50.81 |
| KRH12195 | Soybean | cytosol | 49.61 | 49.41 |
| CDY43172 | Canola | nucleus | 38.58 | 48.76 |
| KRH37216 | Soybean | cytosol | 48.82 | 48.06 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 43.31 | 46.41 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 30.71 | 32.23 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 27.17 | 32.09 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 25.2 | 31.53 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 25.98 | 31.28 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 26.38 | 31.16 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 23.62 | 30.77 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 29.92 | 30.52 |
| Bra023155.1-P | Field mustard | nucleus | 37.8 | 29.54 |
| TraesCS6D01G157500.1 | Wheat | cytosol | 25.2 | 29.22 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 27.95 | 28.86 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 24.8 | 28.77 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 29.53 | 28.2 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 26.77 | 25.56 |
| TraesCS1D01G069600.1 | Wheat | cytosol, nucleus, plastid | 24.41 | 24.8 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G466400.1 | EnsemblPlantsGene:TraesCS7D01G466400 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31065 |
| PANTHER:PTHR31065:SF32 | PFAM:PF04640 | PFscan:PS50119 | SEG:seg | SUPFAM:SSF57845 | MapMan:15.5.43 |
Description
No Description!
Coordinates
chr7D:-:580263677..580267105
Molecular Weight (calculated)
28089.8 Da
IEP (calculated)
8.609
GRAVY (calculated)
-0.280
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMRPGWVGG LVEETFFVAC SAHESRKKNE KNIFCLACRT SICPHCAPAH RHHPLIQVRR YVYNDVVRLD DLERLIDCSF VQPYTINSAK VIFLKPRPQS
101: RPFKGSGNVC LTCDRILQEP FHFCCLSCKV DHVMMQGGDL SNILYMSGEP DVACFPRFEN LRVGSGSADI LDDGCATGGQ ITPNSILEDP MHHYGGSSYR
201: SGGSSRNARG FDAAASVDVP IPVPRKKKSG GFFPQIVMSL NNRRKGAPHR SPFA
101: RPFKGSGNVC LTCDRILQEP FHFCCLSCKV DHVMMQGGDL SNILYMSGEP DVACFPRFEN LRVGSGSADI LDDGCATGGQ ITPNSILEDP MHHYGGSSYR
201: SGGSSRNARG FDAAASVDVP IPVPRKKKSG GFFPQIVMSL NNRRKGAPHR SPFA
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.