Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g068510.1.1 | Tomato | cytosol | 68.97 | 74.69 |
| KRH42391 | Soybean | nucleus | 53.64 | 70.0 |
| KRH58510 | Soybean | nucleus | 52.87 | 69.35 |
| KRH12195 | Soybean | cytosol | 67.43 | 69.02 |
| CDX98234 | Canola | cytosol | 45.21 | 68.6 |
| KRH37216 | Soybean | cytosol | 67.43 | 68.22 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 60.15 | 65.42 |
| CDY12444 | Canola | nucleus | 60.15 | 65.42 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 56.32 | 65.04 |
| AT1G31040.1 | Thale cress | nucleus | 60.54 | 65.02 |
| CDY27171 | Canola | nucleus | 59.77 | 65.0 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.79 | 64.13 |
| Bra014899.1-P | Field mustard | nucleus | 59.39 | 63.01 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 50.57 | 62.26 |
| VIT_00s0233g00100.t01 | Wine grape | cytosol | 32.18 | 61.76 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 56.7 | 60.91 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 52.49 | 60.09 |
| CDY02353 | Canola | mitochondrion, nucleus | 42.53 | 60.0 |
| CDY43172 | Canola | nucleus | 44.44 | 57.71 |
| Os02t0172800-01 | Rice | cytosol | 53.26 | 57.68 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 53.64 | 57.61 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 53.26 | 57.2 |
| EER90181 | Sorghum | cytosol | 53.64 | 56.68 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 55.17 | 56.47 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 54.79 | 56.3 |
| EES04603 | Sorghum | nucleus | 55.56 | 56.2 |
| Os06t0666100-01 | Rice | nucleus | 55.94 | 55.94 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 54.41 | 55.91 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 54.79 | 55.86 |
| Zm00001d046958_P001 | Maize | nucleus | 52.49 | 54.8 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 39.46 | 53.93 |
| Zm00001d015394_P001 | Maize | cytosol | 52.87 | 52.27 |
| VIT_15s0048g00580.t01 | Wine grape | nucleus | 44.44 | 46.4 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 42.91 | 45.71 |
| VIT_02s0154g00150.t01 | Wine grape | nucleus | 42.15 | 45.08 |
| VIT_03s0063g02240.t01 | Wine grape | extracellular | 39.08 | 42.32 |
| Bra023155.1-P | Field mustard | nucleus | 49.81 | 40.0 |
| VIT_06s0061g00880.t01 | Wine grape | cytosol | 17.62 | 34.59 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 27.97 | 31.6 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 28.74 | 30.49 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 26.05 | 29.57 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 27.59 | 27.48 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 26.44 | 20.97 |
Protein Annotations
| EntrezGene:100268160 | wikigene:100268160 | MapMan:15.5.43 | ProteinID:CCB51025 | ProteinID:CCB51025.1 | InterPro:DUF597 |
| UniProt:F6HFS9 | EMBL:FN595752 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008270 | InterPro:IPR000315 | EntrezGene:LOC100268160 | wikigene:LOC100268160 | PFAM:PF04640 |
| PFscan:PS50119 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | UniParc:UPI00015C74AB | ArrayExpress:VIT_01s0011g01410 | EnsemblPlantsGene:VIT_01s0011g01410 |
| EnsemblPlants:VIT_01s0011g01410.t01 | unigene:Vvi.20531 | RefSeq:XP_002275249 | RefSeq:XP_002275249.1 | InterPro:Znf_B-box | SEG:seg |
Description
No Description!
Coordinates
chr1:-:1219738..1221546
Molecular Weight (calculated)
28780.1 Da
IEP (calculated)
7.788
GRAVY (calculated)
-0.421
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MVRESSSGGG GGGGGGGVAG GGGGDMVMKP AWLDGLMAET FFAGCGVHEN RRKNEKNVFC LECCQSICPH CLPSHRSHPL LQVRRYVYHD VVRLDDLEKL
101: INCSYIQPYT INSAKVIFLN QRPQSRSCKG SANICFTCDR ILQEPFRFCS ISCKVDYMVY QGEDLSSIIY RFDESDFAYS QFEGLRMEDE EGQITPNSIL
201: EDPLQFKASS CSSNETSGNS GISRDPEAVV RKKKKSTGFL PGNFLSLSSR RKGAPHRSPL S
101: INCSYIQPYT INSAKVIFLN QRPQSRSCKG SANICFTCDR ILQEPFRFCS ISCKVDYMVY QGEDLSSIIY RFDESDFAYS QFEGLRMEDE EGQITPNSIL
201: EDPLQFKASS CSSNETSGNS GISRDPEAVV RKKKKSTGFL PGNFLSLSSR RKGAPHRSPL S
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.