Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0233g00100.t01 | Wine grape | cytosol | 36.84 | 36.03 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 44.36 | 25.54 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 41.35 | 23.91 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 45.86 | 23.28 |
| VIT_03s0063g02240.t01 | Wine grape | extracellular | 37.59 | 20.75 |
| VIT_02s0154g00150.t01 | Wine grape | nucleus | 37.59 | 20.49 |
| VIT_15s0048g00580.t01 | Wine grape | nucleus | 37.59 | 20.0 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 35.34 | 19.18 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 46.62 | 18.84 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 33.08 | 17.89 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 34.59 | 17.62 |
Protein Annotations
| ArrayExpress:VIT_06s0061g00880 | EMBL:FN594957 | EnsemblPlants:VIT_06s0061g00880.t01 | EnsemblPlantsGene:VIT_06s0061g00880 | EntrezGene:100263681 | EntrezGene:LOC100263681 |
| InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF31 | PFAM:PF04640 | ProteinID:CBI17118 | ProteinID:CBI17118.3 |
| RefSeq:XP_002272234 | RefSeq:XP_002272234.2 | SUPFAM:SSF57845 | UniParc:UPI0001BE0F03 | UniProt:D7SN89 | wikigene:100263681 |
| wikigene:LOC100263681 | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr6:-:18422781..18423262
Molecular Weight (calculated)
15090.3 Da
IEP (calculated)
8.820
GRAVY (calculated)
-0.129
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVPPWVESF LSTRFYSGCT KHPDAAHKEC NMFCIDCRSD AFCSHCRISL HSGHAVIQIR RSSYHNAVKV MEVEKLLDVS GVQSYVVNKC KVVYLDRKTQ
101: VKPSNGNASH ACEVCRRGLL TNFRFCSLRC KVC
101: VKPSNGNASH ACEVCRRGLL TNFRFCSLRC KVC
001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV RFPTPFLNAK FLFVAGWINH EQKPVNFIS
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV RFPTPFLNAK FLFVAGWINH EQKPVNFIS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.