Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75604 | Soybean | nucleus | 71.76 | 89.52 |
| KRH74408 | Soybean | nucleus | 79.01 | 87.71 |
| KRH39550 | Soybean | nucleus | 78.24 | 86.86 |
| PGSC0003DMT400045164 | Potato | nucleus | 71.37 | 82.38 |
| Solyc08g076860.2.1 | Tomato | nucleus | 70.99 | 81.58 |
| AT1G32700.1 | Thale cress | cytosol | 61.07 | 75.12 |
| PGSC0003DMT400046007 | Potato | cytosol | 64.12 | 75.0 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 66.03 | 74.89 |
| PGSC0003DMT400019836 | Potato | nucleus | 63.74 | 74.89 |
| Solyc06g061240.2.1 | Tomato | nucleus | 63.74 | 74.55 |
| CDY01500 | Canola | nucleus | 60.31 | 73.83 |
| Bra035494.1-P | Field mustard | nucleus | 61.45 | 73.52 |
| Bra012632.1-P | Field mustard | nucleus | 59.92 | 73.36 |
| CDX90437 | Canola | nucleus | 59.54 | 72.9 |
| AT4G17900.1 | Thale cress | nucleus | 62.6 | 72.25 |
| Solyc08g005100.2.1 | Tomato | cytosol | 61.07 | 71.43 |
| CDY44504 | Canola | nucleus | 61.83 | 71.37 |
| CDX78810 | Canola | nucleus | 61.45 | 70.93 |
| CDX76551 | Canola | nucleus | 60.31 | 70.54 |
| Bra013266.1-P | Field mustard | nucleus | 61.07 | 70.48 |
| CDY08880 | Canola | nucleus | 59.92 | 70.09 |
| Bra021029.1-P | Field mustard | nucleus | 59.92 | 70.09 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 64.5 | 68.15 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 64.5 | 67.87 |
| Os04t0591100-01 | Rice | nucleus | 63.74 | 67.07 |
| KXG30975 | Sorghum | nucleus | 63.36 | 65.87 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 61.83 | 65.85 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 61.45 | 65.45 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 61.45 | 65.45 |
| Os02t0692700-01 | Rice | nucleus | 64.12 | 65.37 |
| EES12755 | Sorghum | nucleus | 62.21 | 64.94 |
| Zm00001d017682_P001 | Maize | nucleus | 62.21 | 64.68 |
| Zm00001d051511_P001 | Maize | nucleus | 60.69 | 63.35 |
| Zm00001d026047_P002 | Maize | nucleus | 60.69 | 62.85 |
| Zm00001d002489_P001 | Maize | nucleus | 61.07 | 62.5 |
| Bra023280.1-P | Field mustard | mitochondrion | 66.41 | 61.48 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 64.12 | 61.09 |
| CDY69918 | Canola | nucleus | 52.29 | 60.62 |
| CDY69910 | Canola | nucleus | 52.29 | 60.62 |
| CDY35177 | Canola | nucleus | 52.67 | 60.26 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 64.89 | 59.86 |
| Bra017531.1-P | Field mustard | nucleus | 52.29 | 59.83 |
| Bra025003.1-P | Field mustard | nucleus | 51.53 | 59.73 |
| CDY03199 | Canola | nucleus | 51.15 | 59.56 |
| CDY72135 | Canola | cytosol, nucleus | 47.71 | 58.14 |
| CDX87686 | Canola | nucleus | 51.15 | 58.01 |
| CDY66745 | Canola | nucleus | 49.24 | 57.85 |
| Bra022055.1-P | Field mustard | nucleus | 49.24 | 57.85 |
| CDY44664 | Canola | plasma membrane | 64.89 | 57.82 |
| Bra022058.1-P | Field mustard | nucleus | 50.38 | 57.64 |
| CDX87684 | Canola | nucleus | 50.76 | 56.6 |
| AT5G46710.1 | Thale cress | nucleus | 48.09 | 55.75 |
| VIT_00s0233g00100.t01 | Wine grape | cytosol | 25.19 | 48.53 |
| VIT_06s0061g00880.t01 | Wine grape | cytosol | 23.28 | 45.86 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 53.05 | 43.3 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 36.26 | 41.3 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 53.05 | 38.19 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 45.04 | 35.87 |
| VIT_02s0154g00150.t01 | Wine grape | nucleus | 30.15 | 32.38 |
| VIT_15s0048g00580.t01 | Wine grape | nucleus | 30.53 | 32.0 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 29.01 | 31.02 |
| VIT_03s0063g02240.t01 | Wine grape | extracellular | 28.24 | 30.71 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 26.34 | 28.05 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 27.48 | 27.59 |
Protein Annotations
| EntrezGene:100250554 | wikigene:100250554 | MapMan:15.5.43 | EMBL:AM471171 | ProteinID:CAN63851 | ProteinID:CAN63851.1 |
| ProteinID:CBI33878 | ProteinID:CBI33878.3 | UniProt:D7TTW3 | InterPro:DUF597 | EMBL:FN596247 | EntrezGene:LOC100250554 |
| wikigene:LOC100250554 | PFAM:PF04640 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF8 | TIGR:TC65885 | UniParc:UPI0001982BFC |
| ArrayExpress:VIT_02s0012g01400 | EnsemblPlantsGene:VIT_02s0012g01400 | EnsemblPlants:VIT_02s0012g01400.t01 | unigene:Vvi.7142 | RefSeq:XP_002277964 | RefSeq:XP_002277964.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:+:7559107..7561604
Molecular Weight (calculated)
29108.6 Da
IEP (calculated)
9.138
GRAVY (calculated)
-0.548
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKEGGRFL AANASGLGSG SELGSLAIDN QESAVREIKP KSRRIMGAGG PDEEDNRWPP WLKPLLRESF FVQCKLHADS HKSECNMYCL DCMNGALCSL
101: CLGYHKDHRA IQIRRSSYHD VIRVSEIQKV LDITGVQTYI INSARVVFLN ERPQPRPGKG VTNTCEVCER SLLDSFRFCS LGCKIVGTST NFQKKKHQQP
201: ATASSDSEES YSSSSHGRQA LNAVQSFSPS TPPPTAVNYR TAKRRKGIPH RAPMGGLIIE YY
101: CLGYHKDHRA IQIRRSSYHD VIRVSEIQKV LDITGVQTYI INSARVVFLN ERPQPRPGKG VTNTCEVCER SLLDSFRFCS LGCKIVGTST NFQKKKHQQP
201: ATASSDSEES YSSSSHGRQA LNAVQSFSPS TPPPTAVNYR TAKRRKGIPH RAPMGGLIIE YY
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.