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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • nucleus 3
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_00s0233g00100.t01 Wine grape cytosol 42.8 78.68
KRG88921 Soybean nucleus 73.2 75.62
Solyc01g091000.2.1 Tomato cytosol, nucleus, plasma membrane 71.2 71.2
KRH75326 Soybean extracellular, plasma membrane 77.2 69.68
VIT_02s0154g00150.t01 Wine grape nucleus 66.0 67.62
GSMUA_Achr11P... Banana cytosol 57.2 61.37
AT3G60670.1 Thale cress cytosol 58.0 59.18
CDY41149 Canola cytosol, extracellular, nucleus 52.0 56.52
CDX71792 Canola cytosol 54.8 56.38
Bra007550.1-P Field mustard extracellular, nucleus, vacuole 51.6 56.09
Bra014478.1-P Field mustard cytosol 55.2 55.65
CDY48369 Canola cytosol 55.2 55.42
CDX89067 Canola cytosol 54.8 55.24
VIT_03s0063g02240.t01 Wine grape extracellular 53.2 55.19
VIT_11s0118g00600.t01 Wine grape nucleus 53.6 54.69
VIT_01s0011g01410.t01 Wine grape nucleus 46.4 44.44
VIT_06s0061g00880.t01 Wine grape cytosol 20.0 37.59
VIT_16s0039g01560.t01 Wine grape nucleus 32.4 35.06
VIT_02s0012g01400.t01 Wine grape nucleus 32.0 30.53
VIT_01s0011g06060.t01 Wine grape nucleus 29.6 30.08
VIT_08s0007g04560.t01 Wine grape cytosol 25.6 27.83
VIT_18s0122g00320.t01 Wine grape cytosol 28.4 21.58
Protein Annotations
EntrezGene:100248806wikigene:100248806MapMan:15.5.43ProteinID:CBI38881ProteinID:CBI38881.3UniProt:D7U7V2
InterPro:DUF597EMBL:FN596739GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0008270InterPro:IPR000315EntrezGene:LOC100248806wikigene:LOC100248806PFAM:PF04640
PFscan:PS50119PANTHER:PTHR31065PANTHER:PTHR31065:SF1UniParc:UPI00015CA39FArrayExpress:VIT_15s0048g00580EnsemblPlantsGene:VIT_15s0048g00580
EnsemblPlants:VIT_15s0048g00580.t01unigene:Vvi.19552RefSeq:XP_002280288RefSeq:XP_002280288.1InterPro:Znf_B-boxSEG:seg
Description
No Description!
Coordinates
chr15:+:14718053..14719871
Molecular Weight (calculated)
28164.8 Da
IEP (calculated)
8.433
GRAVY (calculated)
-0.345
Length
250 amino acids
Sequence
(BLAST)
001: MVSSNLLPRW LEALLREKFF NACVIHEYAK KNEKNIFCLD CCTSICPHCL SPHRSHRLLQ IRRYVYHDVI RLDDAEKLMD CASVQAYTTN SAKVVFLNQR
101: PQTRQFRGSG NICSTCDRSL QDPYHFCSLS CKIDYLLRTE GKLSKYLFEC EYLTLPEPGC ELEDGLLTPD SVLEPPGSMR TSSSSSAGEG AGGVGCRTLA
201: CTATTEFVRK KRSSVSVYRT ACRPIYSPVS EISAGMMNRR KGTPQRSPLY
Best Arabidopsis Sequence Match ( AT3G60670.1 )
(BLAST)
001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
Arabidopsis Description
At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.