Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g085800.1.1 | Tomato | extracellular | 56.52 | 63.41 |
| PGSC0003DMT400022166 | Potato | extracellular | 56.52 | 63.41 |
| KRH25132 | Soybean | cytosol | 51.3 | 53.64 |
| Bra034379.1-P | Field mustard | nucleus | 43.04 | 51.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 48.26 | 51.15 |
| Bra011992.1-P | Field mustard | nucleus | 41.3 | 50.26 |
| CDY04518 | Canola | nucleus | 41.3 | 50.26 |
| CDY30518 | Canola | cytosol | 41.74 | 50.26 |
| CDX71409 | Canola | nucleus | 40.87 | 50.0 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 46.09 | 49.3 |
| AT2G27930.5 | Thale cress | plastid | 39.57 | 47.4 |
| TraesCS7A01G281000.1 | Wheat | cytosol | 43.04 | 46.26 |
| KRH30543 | Soybean | nucleus | 36.09 | 46.11 |
| Os08t0560300-01 | Rice | cytosol | 40.0 | 46.0 |
| KXG25377 | Sorghum | extracellular | 42.17 | 45.97 |
| Zm00001d031925_P001 | Maize | cytosol | 42.17 | 45.75 |
| Os11t0428700-00 | Rice | cytosol | 24.35 | 42.75 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 38.7 | 41.4 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 38.7 | 41.4 |
| VIT_06s0061g00880.t01 | Wine grape | cytosol | 23.91 | 41.35 |
| Os01t0517800-01 | Rice | extracellular | 30.43 | 40.94 |
| TraesCS3A01G497600.1 | Wheat | extracellular | 38.26 | 40.93 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 38.26 | 40.93 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 38.26 | 40.93 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 37.83 | 40.47 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 37.83 | 40.28 |
| OQU78879 | Sorghum | endoplasmic reticulum | 36.96 | 39.91 |
| EES15787 | Sorghum | endoplasmic reticulum | 36.96 | 39.72 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 39.57 | 39.39 |
| HORVU7Hr1G059900.4 | Barley | cytosol | 36.52 | 39.07 |
| Zm00001d009292_P001 | Maize | extracellular | 35.65 | 38.32 |
| Os01t0518000-01 | Rice | cytosol | 36.09 | 38.25 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 42.61 | 36.84 |
| TraesCS7B01G180100.1 | Wheat | cytosol | 42.61 | 36.7 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 41.3 | 36.26 |
| VIT_00s0233g00100.t01 | Wine grape | cytosol | 20.87 | 35.29 |
| TraesCS3A01G497900.1 | Wheat | cytosol | 32.61 | 32.75 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 28.7 | 26.94 |
| VIT_02s0154g00150.t01 | Wine grape | nucleus | 27.83 | 26.23 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 29.57 | 26.05 |
| VIT_15s0048g00580.t01 | Wine grape | nucleus | 27.83 | 25.6 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 26.52 | 24.8 |
| VIT_03s0063g02240.t01 | Wine grape | extracellular | 24.78 | 23.65 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 33.48 | 23.4 |
Protein Annotations
| ArrayExpress:VIT_08s0007g04560 | EMBL:FN595991 | EnsemblPlants:VIT_08s0007g04560.t01 | EnsemblPlantsGene:VIT_08s0007g04560 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF31 | PFAM:PF04640 | ProteinID:CCB55363 |
| ProteinID:CCB55363.1 | SEG:seg | TMHMM:TMhelix | unigene:Vvi.19924 | UniParc:UPI00021098F0 | UniProt:F6HKE1 |
| MapMan:15.5.43 | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:18472921..18476769
Molecular Weight (calculated)
25857.1 Da
IEP (calculated)
10.200
GRAVY (calculated)
-0.503
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVPRYQTVP DSLPEFHLRV QNKRQCRFHR GWNHCSPHPS SPSAAPMEMR PGANATCIAW IAVATPFAFI AAHLDTRIIK SFRQIRRSSY HDVVRVAEIQ
101: KVLDISGVQT YVINSARVLF LNERPQPKTG KGVSHICETC GRSLLDPFRF CSLGCKLVGI KRNGDASFSL EAKNEMAMER GEGISRRESS RDEDELREGL
201: QQDIYPPTPP PPPSSARRRK GIPHRAPFAS
101: KVLDISGVQT YVINSARVLF LNERPQPKTG KGVSHICETC GRSLLDPFRF CSLGCKLVGI KRNGDASFSL EAKNEMAMER GEGISRRESS RDEDELREGL
201: QQDIYPPTPP PPPSSARRRK GIPHRAPFAS
001: MSATCSVSPV KTLRFASTAA PPFTLIIPSF RSFIFSTHNA YTYIYISLLT QSNSLSLTLR QIRRSSYHDV VRVSEIENAL DIRGVQTYVI NSARVLFLNE
101: RPQPKNSSHG AASSTPKTMS YFCETCCRTL LDPFRFCSLG CKVEGMRKNK EEEEERLRKE RQQETHKGTH PPTHTSNSRR RKGIPHRAPF AS
101: RPQPKNSSHG AASSTPKTMS YFCETCCRTL LDPFRFCSLG CKVEGMRKNK EEEEERLRKE RQQETHKGTH PPTHTSNSRR RKGIPHRAPF AS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.