Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G281000.1 | Wheat | cytosol | 78.28 | 97.66 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 94.76 | 95.11 |
| KXG25377 | Sorghum | extracellular | 63.67 | 80.57 |
| Zm00001d031925_P001 | Maize | cytosol | 62.92 | 79.25 |
| Os08t0560300-01 | Rice | cytosol | 58.05 | 77.5 |
| HORVU7Hr1G059900.4 | Barley | cytosol | 62.17 | 77.21 |
| Os11t0428700-00 | Rice | cytosol | 32.21 | 65.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.81 | 61.29 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 47.19 | 58.6 |
| KRH19979 | Soybean | cytosol | 42.7 | 54.55 |
| CDX71409 | Canola | nucleus | 38.2 | 54.26 |
| Bra011992.1-P | Field mustard | nucleus | 38.2 | 53.97 |
| CDY30518 | Canola | cytosol | 38.58 | 53.93 |
| CDY04518 | Canola | nucleus | 37.83 | 53.44 |
| Bra034379.1-P | Field mustard | nucleus | 38.2 | 53.4 |
| PGSC0003DMT400022166 | Potato | extracellular | 40.82 | 53.17 |
| Solyc10g085800.1.1 | Tomato | extracellular | 40.82 | 53.17 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 41.95 | 52.09 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 41.95 | 52.09 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 41.57 | 51.39 |
| KRH32606 | Soybean | extracellular | 42.32 | 50.9 |
| KRH25132 | Soybean | cytosol | 41.57 | 50.45 |
| KRG96080 | Soybean | cytosol | 40.82 | 49.77 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 40.82 | 49.32 |
| KRH30543 | Soybean | nucleus | 29.21 | 43.33 |
| AT2G27930.5 | Thale cress | plastid | 30.71 | 42.71 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 36.7 | 42.61 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 36.7 | 40.5 |
| TraesCS6B01G196100.1 | Wheat | cytosol, mitochondrion | 31.84 | 40.28 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 35.58 | 38.31 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 34.46 | 37.4 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 35.21 | 36.58 |
| TraesCS2B01G524600.1 | Wheat | mitochondrion | 21.72 | 36.02 |
| TraesCS1B01G086700.1 | Wheat | cytosol, nucleus, plastid | 29.96 | 31.13 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 25.09 | 28.27 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 20.6 | 27.78 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 25.47 | 26.56 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G180100.1 | EnsemblPlantsGene:TraesCS7B01G180100 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF31 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:268454131..268455085
Molecular Weight (calculated)
29134.8 Da
IEP (calculated)
9.854
GRAVY (calculated)
-0.266
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMRRVAPPA SEDDSSGSGV PGWLEALLGT RFFLACAAHP GSPRNECNMF CIDCRATPAA FCYYCRSHRH ASHRVIQIRR SSYHDVVRVT EVEDVLDIAG
101: VQTYVINSAR VLFLNERPQP RGAGAAAGKA AASPYNCEIC GRALLDPFRF CSLGCKVHLP FFSALPAQDK LHDIFPFFQS FFSFRHSTMP MPFVRLVRSR
201: LIRFSSVSPS RMQLVDTKTH GHGHGHGATV DGGGGSGSEA EAGGSKNGAR PQGRRRKGTP HRAPFGS
101: VQTYVINSAR VLFLNERPQP RGAGAAAGKA AASPYNCEIC GRALLDPFRF CSLGCKVHLP FFSALPAQDK LHDIFPFFQS FFSFRHSTMP MPFVRLVRSR
201: LIRFSSVSPS RMQLVDTKTH GHGHGHGATV DGGGGSGSEA EAGGSKNGAR PQGRRRKGTP HRAPFGS
001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV RFPTPFLNAK FLFVAGWINH EQKPVNFIS
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV RFPTPFLNAK FLFVAGWINH EQKPVNFIS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.