Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G447400.1 | Wheat | cytosol | 98.78 | 98.78 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 98.37 | 98.37 |
| Os04t0591100-01 | Rice | nucleus | 86.59 | 85.54 |
| EES12755 | Sorghum | nucleus | 83.33 | 81.67 |
| Zm00001d002489_P001 | Maize | nucleus | 81.71 | 78.52 |
| Zm00001d026047_P002 | Maize | nucleus | 78.86 | 76.68 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 77.24 | 76.61 |
| KRH75604 | Soybean | nucleus | 63.82 | 74.76 |
| KRH74408 | Soybean | nucleus | 65.85 | 68.64 |
| PGSC0003DMT400045164 | Potato | nucleus | 62.6 | 67.84 |
| KRH39550 | Soybean | nucleus | 65.04 | 67.8 |
| Solyc08g076860.2.1 | Tomato | nucleus | 61.79 | 66.67 |
| AT1G32700.1 | Thale cress | cytosol | 57.32 | 66.2 |
| KRH24008 | Soybean | cytosol | 59.76 | 65.92 |
| Bra035494.1-P | Field mustard | nucleus | 58.54 | 65.75 |
| PGSC0003DMT400046007 | Potato | cytosol | 59.76 | 65.62 |
| Solyc06g061240.2.1 | Tomato | nucleus | 59.35 | 65.18 |
| PGSC0003DMT400019836 | Potato | nucleus | 58.94 | 65.02 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 58.94 | 65.02 |
| Solyc08g005100.2.1 | Tomato | cytosol | 58.54 | 64.29 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 60.16 | 64.07 |
| CDY01500 | Canola | nucleus | 55.28 | 63.55 |
| KRH27687 | Soybean | cytosol | 60.16 | 63.52 |
| CDY08880 | Canola | nucleus | 57.32 | 62.95 |
| CDX90437 | Canola | nucleus | 54.47 | 62.62 |
| Bra012632.1-P | Field mustard | nucleus | 54.47 | 62.62 |
| AT4G17900.1 | Thale cress | nucleus | 57.72 | 62.56 |
| CDX76551 | Canola | nucleus | 56.91 | 62.5 |
| Bra021029.1-P | Field mustard | nucleus | 56.91 | 62.5 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 65.45 | 61.45 |
| CDY44504 | Canola | nucleus | 56.5 | 61.23 |
| CDX78810 | Canola | nucleus | 56.1 | 60.79 |
| Bra013266.1-P | Field mustard | nucleus | 55.69 | 60.35 |
| KRH77790 | Soybean | nucleus | 60.98 | 59.76 |
| CDY35177 | Canola | nucleus | 53.25 | 57.21 |
| CDY03199 | Canola | nucleus | 52.03 | 56.89 |
| Bra017531.1-P | Field mustard | nucleus | 52.85 | 56.77 |
| CDY69910 | Canola | nucleus | 51.63 | 56.19 |
| CDY69918 | Canola | nucleus | 51.22 | 55.75 |
| Bra025003.1-P | Field mustard | nucleus | 51.22 | 55.75 |
| AT5G46710.1 | Thale cress | nucleus | 48.37 | 52.65 |
| Bra022055.1-P | Field mustard | nucleus | 47.56 | 52.47 |
| CDY66745 | Canola | nucleus | 47.56 | 52.47 |
| CDY72135 | Canola | cytosol, nucleus | 45.53 | 52.09 |
| CDX87686 | Canola | nucleus | 48.78 | 51.95 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 59.35 | 51.41 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 53.66 | 51.36 |
| Bra022058.1-P | Field mustard | nucleus | 47.15 | 50.66 |
| Bra023280.1-P | Field mustard | mitochondrion | 57.72 | 50.18 |
| CDY44664 | Canola | plasma membrane | 59.35 | 49.66 |
| CDX87684 | Canola | nucleus | 47.15 | 49.36 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 44.31 | 45.04 |
| TraesCS6B01G196100.1 | Wheat | cytosol, mitochondrion | 35.77 | 41.71 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 36.18 | 41.4 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 36.18 | 41.4 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 36.18 | 41.2 |
| TraesCS2B01G524600.1 | Wheat | mitochondrion | 25.2 | 38.51 |
| TraesCS1B01G086700.1 | Wheat | cytosol, nucleus, plastid | 37.8 | 36.19 |
| TraesCS7B01G180100.1 | Wheat | cytosol | 37.4 | 34.46 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 49.19 | 33.24 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 26.42 | 32.83 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 30.08 | 31.22 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 29.27 | 28.12 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G469000.1 | EnsemblPlantsGene:TraesCS2B01G469000 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:664933026..664935104
Molecular Weight (calculated)
27127.5 Da
IEP (calculated)
9.241
GRAVY (calculated)
-0.435
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFHDEAPLL LRINTARGGH MGGGECDEAE NQRWPPWLKP LLATSFFGQC KMHADAHKCE CNMYCLDCIN GALCSQCLAY HHGHHAIQIR RSSYHDVIRV
101: SEIQKVLDIT GVQTYIINSA RVVFLNERPQ PRPGKGVTNT CDVCERSLLD TFRFCSLGCK IVGTSGEFRG RKRHAGGKKM KLKLKKAAAS DSDDSSTITS
201: GGSDKSSVVQ SFSPSTPPAT ANSYRSSKRR KGIPHRSPFG NLIVEF
101: SEIQKVLDIT GVQTYIINSA RVVFLNERPQ PRPGKGVTNT CDVCERSLLD TFRFCSLGCK IVGTSGEFRG RKRHAGGKKM KLKLKKAAAS DSDDSSTITS
201: GGSDKSSVVQ SFSPSTPPAT ANSYRSSKRR KGIPHRSPFG NLIVEF
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.