Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G248200.1 | Wheat | cytosol | 97.47 | 95.07 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 96.97 | 94.58 |
| EES07500 | Sorghum | nucleus | 79.29 | 78.5 |
| Zm00001d051376_P001 | Maize | cytosol | 76.26 | 76.26 |
| Os02t0661400-00 | Rice | cytosol | 81.82 | 71.68 |
| PGSC0003DMT400097455 | Potato | cytosol | 18.18 | 33.33 |
| PGSC0003DMT400090715 | Potato | cytosol | 17.68 | 32.41 |
| Solyc07g049120.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 24.75 | 30.82 |
| Solyc07g049130.1.1 | Tomato | nucleus | 24.75 | 30.82 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 34.85 | 29.11 |
| PGSC0003DMT400089328 | Potato | vacuole | 23.23 | 28.93 |
| KRH72960 | Soybean | nucleus | 14.65 | 28.71 |
| Solyc02g033100.1.1 | Tomato | nucleus | 25.25 | 27.62 |
| TraesCS6B01G196100.1 | Wheat | cytosol, mitochondrion | 29.29 | 27.49 |
| Solyc02g033120.1.1 | Tomato | nucleus | 21.72 | 26.88 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.79 | 26.64 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 32.83 | 26.42 |
| Solyc02g033110.1.1 | Tomato | nucleus | 21.21 | 26.25 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 27.78 | 25.58 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 27.78 | 25.58 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 27.78 | 25.46 |
| Solyc02g036170.1.1 | Tomato | nucleus | 21.72 | 25.44 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 32.32 | 25.0 |
| Solyc02g036230.1.1 | Tomato | nucleus | 22.73 | 24.86 |
| Solyc02g036140.1.1 | Tomato | nucleus | 21.21 | 24.85 |
| CDY09414 | Canola | cytosol | 27.27 | 24.55 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 30.3 | 24.19 |
| Solyc02g036130.1.1 | Tomato | cytosol | 16.67 | 24.09 |
| CDY17645 | Canola | nucleus | 28.28 | 24.03 |
| Solyc02g036200.1.1 | Tomato | nucleus | 21.72 | 24.02 |
| PGSC0003DMT400075780 | Potato | nucleus | 24.75 | 24.02 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 29.29 | 23.97 |
| CDY36264 | Canola | nucleus | 23.23 | 23.96 |
| TraesCS2B01G524600.1 | Wheat | mitochondrion | 19.19 | 23.6 |
| Solyc04g008090.2.1 | Tomato | cytosol | 25.25 | 23.47 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 30.3 | 23.35 |
| KRH49692 | Soybean | nucleus | 26.26 | 23.11 |
| AT2G01818.1 | Thale cress | nucleus | 25.76 | 22.97 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 27.78 | 22.36 |
| TraesCS7B01G180100.1 | Wheat | cytosol | 27.78 | 20.6 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 16.67 | 20.37 |
| TraesCS1B01G086700.1 | Wheat | cytosol, nucleus, plastid | 25.25 | 19.46 |
| KRH41746 | Soybean | nucleus | 23.23 | 19.33 |
| KRH60448 | Soybean | nucleus | 23.23 | 19.33 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G276500.1 | EnsemblPlantsGene:TraesCS6B01G276500 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF17 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:500238878..500239756
Molecular Weight (calculated)
21577.6 Da
IEP (calculated)
8.715
GRAVY (calculated)
-0.432
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSSAVRATP QWLRGLLSEE FFDACAVHPA ERKNDKNHLC ADCAAALCRH CLPHDPSHNV LQIWKYASCF VVRVDDLKLF DCTGIQSHTV SDHEVVFLNE
101: RTARKRSACA ENPCAACARP LSSGHDYCSL FCKVKHLGES ERGLRCALRV NRKAAAAAGE PQNGKRPRAA SSEAGPSCGG SSGKRSRKQL APARSPFC
101: RTARKRSACA ENPCAACARP LSSGHDYCSL FCKVKHLGES ERGLRCALRV NRKAAAAAGE PQNGKRPRAA SSEAGPSCGG SSGKRSRKQL APARSPFC
001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
Arabidopsis Description
At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.