Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36264 | Canola | nucleus | 71.82 | 82.29 |
| AT2G01818.1 | Thale cress | nucleus | 81.82 | 81.08 |
| CDY17645 | Canola | nucleus | 81.82 | 77.25 |
| PGSC0003DMT400075780 | Potato | nucleus | 45.45 | 49.02 |
| Solyc04g008090.2.1 | Tomato | cytosol | 45.0 | 46.48 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 50.45 | 45.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.27 | 33.18 |
| CDX98234 | Canola | cytosol | 25.91 | 33.14 |
| KRH49692 | Soybean | nucleus | 33.64 | 32.89 |
| KRH60448 | Soybean | nucleus | 34.55 | 31.93 |
| KRH41746 | Soybean | nucleus | 34.09 | 31.51 |
| CDY30518 | Canola | cytosol | 26.82 | 30.89 |
| CDY04518 | Canola | nucleus | 26.36 | 30.69 |
| CDY01500 | Canola | nucleus | 29.55 | 30.37 |
| CDX71409 | Canola | nucleus | 25.91 | 30.32 |
| CDX90437 | Canola | nucleus | 28.64 | 29.44 |
| CDX78810 | Canola | nucleus | 29.55 | 28.63 |
| CDY44504 | Canola | nucleus | 29.55 | 28.63 |
| CDX76551 | Canola | nucleus | 28.64 | 28.12 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 29.09 | 27.83 |
| CDY08880 | Canola | nucleus | 28.18 | 27.68 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 25.45 | 27.59 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 25.45 | 27.59 |
| EES07500 | Sorghum | nucleus | 25.0 | 27.5 |
| CDY72135 | Canola | cytosol, nucleus | 26.82 | 27.44 |
| CDY66745 | Canola | nucleus | 27.73 | 27.35 |
| CDY48369 | Canola | cytosol | 30.91 | 27.31 |
| Zm00001d051376_P001 | Maize | cytosol | 24.55 | 27.27 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 24.55 | 27.27 |
| CDY03199 | Canola | nucleus | 27.73 | 27.11 |
| CDY35177 | Canola | nucleus | 28.18 | 27.07 |
| CDX89067 | Canola | cytosol | 30.45 | 27.02 |
| CDY69918 | Canola | nucleus | 27.73 | 26.99 |
| CDY69910 | Canola | nucleus | 27.73 | 26.99 |
| CDX71792 | Canola | cytosol | 29.55 | 26.75 |
| CDY12444 | Canola | nucleus | 28.64 | 26.25 |
| CDY27171 | Canola | nucleus | 28.64 | 26.25 |
| CDX87686 | Canola | nucleus | 27.27 | 25.97 |
| CDX87684 | Canola | nucleus | 27.27 | 25.53 |
| CDX88300 | Canola | nucleus | 26.82 | 24.89 |
| CDX87583 | Canola | nucleus | 26.82 | 24.79 |
| Os02t0661400-00 | Rice | cytosol | 25.45 | 24.78 |
| CDX68093 | Canola | nucleus | 26.82 | 24.69 |
| CDY37203 | Canola | cytosol | 27.73 | 23.92 |
| CDX81439 | Canola | cytosol | 27.73 | 23.83 |
| CDY01340 | Canola | cytosol | 25.0 | 23.61 |
| CDY33661 | Canola | cytosol | 25.91 | 23.46 |
| CDY04591 | Canola | cytosol | 25.91 | 23.36 |
| CDY29486 | Canola | cytosol | 25.91 | 23.36 |
| CDX85958 | Canola | nucleus | 26.36 | 23.2 |
| CDY02353 | Canola | mitochondrion, nucleus | 19.09 | 22.7 |
| CDY00356 | Canola | cytosol | 25.0 | 22.54 |
| CDX93111 | Canola | cytosol | 28.18 | 22.38 |
| CDX89603 | Canola | cytosol | 28.18 | 22.38 |
| CDX96610 | Canola | cytosol | 26.36 | 21.97 |
| CDY43172 | Canola | nucleus | 20.0 | 21.89 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 27.27 | 21.13 |
| CDY44664 | Canola | plasma membrane | 27.27 | 20.41 |
| CDY06424 | Canola | cytosol | 20.45 | 19.74 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 25.45 | 15.38 |
Protein Annotations
| EnsemblPlants:CDY09414 | EnsemblPlantsGene:GSBRNA2T00030905001 | GO:A0A078F8R8 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF15 | PFAM:PF04640 | PFscan:PS50119 | ProteinID:CDY09414 | ProteinID:CDY09414.1 |
| UniParc:UPI0004EF11F5 | UniProt:A0A078F8R8 | MapMan:15.5.43 | : | : | : |
Description
BnaA02g25960DBnaA02g25960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8R8]
Coordinates
chrLK031995:+:774884..776987
Molecular Weight (calculated)
25685.8 Da
IEP (calculated)
8.865
GRAVY (calculated)
-0.658
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLSEKRRVD EDWITTLLSL EFFGICMNHK YLRKNEKNVF CIDCNAQICR HCCNTEAHFL HRRLQICKYV YQDVLRLLDI QHYFDCSEIQ TYKINGEQAI
101: HLNSRPQAKD ARPSTKSKNA GSCVTCKRYI QDRPNRFCSI SCKISASPEK HKFCFSPEIN QSALKKEHYN QEQNLEEKKS CTSSLTDVSE DSDVLLGNFS
201: LRPLIRILKR KGVSRRSPLN
101: HLNSRPQAKD ARPSTKSKNA GSCVTCKRYI QDRPNRFCSI SCKISASPEK HKFCFSPEIN QSALKKEHYN QEQNLEEKKS CTSSLTDVSE DSDVLLGNFS
201: LRPLIRILKR KGVSRRSPLN
001: MNLSEKRRSE EVWIETLLNS EFFGICMNHK YLRKNEKNVF CIDCNVEICR HCCNTVTDSH FLHRRLQICK YVYQDVIRLL EIQNYFDCSE IQTYKINGEK
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A8MQN6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.