Subcellular Localization
min:
: max
Winner_takes_all: golgi, endoplasmic reticulum, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 1
- mitochondrion 1
- cytosol 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G32700.1 | Thale cress | cytosol | 41.21 | 70.42 |
| KRH75604 | Soybean | nucleus | 36.26 | 62.86 |
| CDY01500 | Canola | nucleus | 35.99 | 61.22 |
| CDX90437 | Canola | nucleus | 35.71 | 60.75 |
| Bra023280.1-P | Field mustard | mitochondrion | 45.88 | 59.01 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 45.6 | 58.45 |
| CDX78810 | Canola | nucleus | 36.26 | 58.15 |
| CDY08880 | Canola | nucleus | 35.71 | 58.04 |
| PGSC0003DMT400045164 | Potato | nucleus | 35.99 | 57.71 |
| CDY44504 | Canola | nucleus | 35.99 | 57.71 |
| KRH74408 | Soybean | nucleus | 37.36 | 57.63 |
| CDX76551 | Canola | nucleus | 35.44 | 57.59 |
| Solyc08g076860.2.1 | Tomato | nucleus | 35.71 | 57.02 |
| KRH39550 | Soybean | nucleus | 36.81 | 56.78 |
| PGSC0003DMT400046007 | Potato | cytosol | 34.62 | 56.25 |
| CDY44664 | Canola | plasma membrane | 45.33 | 56.12 |
| PGSC0003DMT400019836 | Potato | nucleus | 34.34 | 56.05 |
| Solyc06g061240.2.1 | Tomato | nucleus | 34.07 | 55.36 |
| Solyc08g005100.2.1 | Tomato | cytosol | 33.24 | 54.02 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 38.19 | 53.05 |
| CDY35177 | Canola | nucleus | 32.97 | 52.4 |
| CDY03199 | Canola | nucleus | 32.14 | 52.0 |
| CDY69918 | Canola | nucleus | 32.14 | 51.77 |
| CDY69910 | Canola | nucleus | 31.87 | 51.33 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 34.89 | 51.21 |
| CDY72135 | Canola | cytosol, nucleus | 30.22 | 51.16 |
| CDY66745 | Canola | nucleus | 31.32 | 51.12 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 34.89 | 51.0 |
| Os04t0591100-01 | Rice | nucleus | 34.89 | 51.0 |
| Os02t0692700-01 | Rice | nucleus | 35.44 | 50.19 |
| EES12755 | Sorghum | nucleus | 34.07 | 49.4 |
| KXG30975 | Sorghum | nucleus | 34.07 | 49.21 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 33.24 | 49.19 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 33.24 | 49.19 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 33.24 | 49.19 |
| CDX87686 | Canola | nucleus | 31.04 | 48.92 |
| Zm00001d017682_P001 | Maize | nucleus | 33.79 | 48.81 |
| Zm00001d026047_P002 | Maize | nucleus | 33.79 | 48.62 |
| Zm00001d002489_P001 | Maize | nucleus | 34.07 | 48.44 |
| Zm00001d051511_P001 | Maize | nucleus | 32.97 | 47.81 |
| CDX87684 | Canola | nucleus | 30.77 | 47.66 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 34.62 | 45.82 |
| CDY01340 | Canola | cytosol | 29.12 | 45.49 |
| CDX68093 | Canola | nucleus | 29.67 | 45.19 |
| CDX88300 | Canola | nucleus | 29.4 | 45.15 |
| CDX87583 | Canola | nucleus | 29.4 | 44.96 |
| CDY30518 | Canola | cytosol | 23.35 | 44.5 |
| CDX71409 | Canola | nucleus | 22.53 | 43.62 |
| CDY04518 | Canola | nucleus | 22.53 | 43.39 |
| CDY00356 | Canola | cytosol | 28.85 | 43.03 |
| CDY04591 | Canola | cytosol | 28.57 | 42.62 |
| CDY29486 | Canola | cytosol | 28.57 | 42.62 |
| CDY33661 | Canola | cytosol | 28.3 | 42.39 |
| CDX85958 | Canola | nucleus | 28.3 | 41.2 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 35.44 | 40.19 |
| CDX96610 | Canola | cytosol | 28.57 | 39.39 |
| CDX98234 | Canola | cytosol | 17.31 | 36.63 |
| CDY06424 | Canola | cytosol | 18.96 | 30.26 |
| CDX81439 | Canola | cytosol | 20.88 | 29.69 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 18.13 | 28.7 |
| CDY37203 | Canola | cytosol | 20.05 | 28.63 |
| CDX89067 | Canola | cytosol | 19.23 | 28.23 |
| CDY12444 | Canola | nucleus | 18.41 | 27.92 |
| CDY27171 | Canola | nucleus | 18.41 | 27.92 |
| CDY48369 | Canola | cytosol | 18.96 | 27.71 |
| CDX71792 | Canola | cytosol | 18.13 | 27.16 |
| CDX93111 | Canola | cytosol | 20.6 | 27.08 |
| CDX89603 | Canola | cytosol | 20.33 | 26.71 |
| CDY36264 | Canola | nucleus | 13.74 | 26.04 |
| CDY09414 | Canola | cytosol | 15.38 | 25.45 |
| CDY17645 | Canola | nucleus | 16.21 | 25.32 |
| CDY43172 | Canola | nucleus | 13.19 | 23.88 |
| CDY02353 | Canola | mitochondrion, nucleus | 11.81 | 23.24 |
Protein Annotations
| EnsemblPlants:CDY01253 | EnsemblPlantsGene:GSBRNA2T00111418001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 | PFAM:PF04640 |
| ProteinID:CDY01253 | ProteinID:CDY01253.1 | SEG:seg | UniParc:UPI0004EE0B67 | MapMan:15.5.43 | : |
Description
BnaC05g24790D
Coordinates
chrLK031925:-:753807..755246
Molecular Weight (calculated)
42088.1 Da
IEP (calculated)
10.038
GRAVY (calculated)
-0.456
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MFIEPSIAKA ISQLRVREQS TCADKNASSF LILHAHLFLS PLLLPCFCHS LSSTNWGSKR ISKLLLSEKS KPTSKRNDHE IDSNFSLSAL INLSFSRIGF
101: FKVRMFFTQI DSVKNLYPVL IRTCIYPGAE EEKNKKWPPW LKPLLREKFF VQCKLHADSH KSECNMYCLD CTSGPLCSLC LSFHKDHHAI QIRRSSYHDV
201: IRVSEIQKFL DITGVQTYVI NSAKVVFLNE RPQPRPGKGV VNTCEVCYRS LVDSFRFCSL GCKVTRKRKH FLYIFSRKIC LGETRPGHFN PDPKTRRPEP
301: EPTQKYSIRN RTENLQVLFG SKFFLPERTG TEKTDPKKPI RIDPYPKRTD PNKPDPIRPD LYPT
101: FKVRMFFTQI DSVKNLYPVL IRTCIYPGAE EEKNKKWPPW LKPLLREKFF VQCKLHADSH KSECNMYCLD CTSGPLCSLC LSFHKDHHAI QIRRSSYHDV
201: IRVSEIQKFL DITGVQTYVI NSAKVVFLNE RPQPRPGKGV VNTCEVCYRS LVDSFRFCSL GCKVTRKRKH FLYIFSRKIC LGETRPGHFN PDPKTRRPEP
301: EPTQKYSIRN RTENLQVLFG SKFFLPERTG TEKTDPKKPI RIDPYPKRTD PNKPDPIRPD LYPT
001: MGPMIRTEEE EDYTSPPWLM PMLRGSYFVP CSIHVDSNKN ECNLFCLDCA GNAFCSYCLV KHKDHRVVQI RRSSYHNVVR VNEIQKFIDI ACVQTYIINS
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF
Arabidopsis Description
At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.