Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74408 | Soybean | nucleus | 92.86 | 82.63 |
| KRH39550 | Soybean | nucleus | 91.9 | 81.78 |
| PGSC0003DMT400045164 | Potato | nucleus | 87.62 | 81.06 |
| Solyc08g076860.2.1 | Tomato | nucleus | 87.14 | 80.26 |
| PGSC0003DMT400046007 | Potato | cytosol | 80.48 | 75.45 |
| Solyc06g061240.2.1 | Tomato | nucleus | 79.52 | 74.55 |
| PGSC0003DMT400019836 | Potato | nucleus | 79.05 | 74.44 |
| AT1G32700.1 | Thale cress | cytosol | 74.76 | 73.71 |
| KRH24008 | Soybean | cytosol | 77.14 | 72.65 |
| Bra035494.1-P | Field mustard | nucleus | 75.24 | 72.15 |
| Solyc08g005100.2.1 | Tomato | cytosol | 76.67 | 71.88 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 89.52 | 71.76 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 75.71 | 71.3 |
| CDY01500 | Canola | nucleus | 70.48 | 69.16 |
| KRH27687 | Soybean | cytosol | 76.19 | 68.67 |
| CDX90437 | Canola | nucleus | 69.52 | 68.22 |
| Bra012632.1-P | Field mustard | nucleus | 69.52 | 68.22 |
| AT4G17900.1 | Thale cress | nucleus | 72.86 | 67.4 |
| CDX78810 | Canola | nucleus | 71.9 | 66.52 |
| CDY44504 | Canola | nucleus | 71.43 | 66.08 |
| Os04t0591100-01 | Rice | nucleus | 77.62 | 65.46 |
| Bra013266.1-P | Field mustard | nucleus | 70.48 | 65.2 |
| Bra021029.1-P | Field mustard | nucleus | 69.52 | 65.18 |
| CDY08880 | Canola | nucleus | 69.52 | 65.18 |
| CDX76551 | Canola | nucleus | 69.52 | 65.18 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 76.67 | 64.92 |
| KRH77790 | Soybean | nucleus | 77.14 | 64.54 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 76.19 | 64.26 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 75.24 | 64.23 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 75.24 | 64.23 |
| KXG30975 | Sorghum | nucleus | 76.67 | 63.89 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 74.76 | 63.82 |
| EES12755 | Sorghum | nucleus | 76.19 | 63.74 |
| Os02t0692700-01 | Rice | nucleus | 77.14 | 63.03 |
| Zm00001d017682_P001 | Maize | nucleus | 74.76 | 62.3 |
| KRH13451 | Soybean | cytosol | 29.05 | 62.24 |
| Zm00001d002489_P001 | Maize | nucleus | 75.24 | 61.72 |
| Zm00001d051511_P001 | Maize | nucleus | 73.33 | 61.35 |
| Zm00001d026047_P002 | Maize | nucleus | 73.81 | 61.26 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 76.19 | 58.18 |
| CDY69918 | Canola | nucleus | 61.43 | 57.08 |
| CDY69910 | Canola | nucleus | 61.43 | 57.08 |
| Bra023280.1-P | Field mustard | mitochondrion | 76.67 | 56.89 |
| KRH45433 | Soybean | plastid | 63.33 | 56.84 |
| CDY35177 | Canola | nucleus | 61.9 | 56.77 |
| Bra017531.1-P | Field mustard | nucleus | 61.43 | 56.33 |
| Bra025003.1-P | Field mustard | nucleus | 60.48 | 56.19 |
| CDY03199 | Canola | nucleus | 60.0 | 56.0 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 75.71 | 55.99 |
| CDY72135 | Canola | cytosol, nucleus | 57.14 | 55.81 |
| KRH19979 | Soybean | cytosol | 54.76 | 55.02 |
| CDY66745 | Canola | nucleus | 58.1 | 54.71 |
| Bra022055.1-P | Field mustard | nucleus | 58.1 | 54.71 |
| CDY44664 | Canola | plasma membrane | 75.24 | 53.74 |
| CDX87686 | Canola | nucleus | 58.1 | 52.81 |
| Bra022058.1-P | Field mustard | nucleus | 57.14 | 52.4 |
| KRH32606 | Soybean | extracellular | 54.76 | 51.8 |
| CDX87684 | Canola | nucleus | 57.14 | 51.06 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 51.43 | 48.87 |
| AT5G46710.1 | Thale cress | nucleus | 52.38 | 48.67 |
| KRG96080 | Soybean | cytosol | 50.48 | 48.4 |
| KRH25132 | Soybean | cytosol | 50.0 | 47.73 |
| KRH30543 | Soybean | nucleus | 37.14 | 43.33 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 63.33 | 41.43 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 62.86 | 36.26 |
| KRH58510 | Soybean | nucleus | 33.81 | 35.68 |
| KRH42391 | Soybean | nucleus | 33.33 | 35.0 |
| KRG88921 | Soybean | nucleus | 38.57 | 33.47 |
| KRH37216 | Soybean | cytosol | 39.52 | 32.17 |
| KRH12861 | Soybean | nucleus | 35.71 | 31.38 |
| KRH12195 | Soybean | cytosol | 38.1 | 31.37 |
| KRH37851 | Soybean | nucleus | 35.24 | 30.96 |
| KRH75326 | Soybean | extracellular, plasma membrane | 39.52 | 29.96 |
| KRH20236 | Soybean | nucleus | 35.24 | 29.96 |
| KRH03576 | Soybean | nucleus | 35.24 | 29.84 |
| KRH41746 | Soybean | nucleus | 33.81 | 29.83 |
| KRH60448 | Soybean | nucleus | 33.81 | 29.83 |
| KRH72960 | Soybean | nucleus | 13.81 | 28.71 |
| KRH49692 | Soybean | nucleus | 30.48 | 28.44 |
| KRH28037 | Soybean | cytosol, nucleus, plastid | 32.86 | 28.4 |
Protein Annotations
| EMBL:ACUP02000409 | EnsemblPlants:KRH75604 | EnsemblPlantsGene:GLYMA_01G096000 | EntrezGene:100777527 | InterPro:DUF597 | PANTHER:PTHR31065 |
| PANTHER:PTHR31065:SF8 | PFAM:PF04640 | ProteinID:KRH75603.1 | ProteinID:KRH75604 | ProteinID:KRH75604.1 | SEG:seg |
| UniParc:UPI00023BB387 | UniProt:I1J6B7 | MapMan:15.5.43 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:30430951..30433513
Molecular Weight (calculated)
23649.3 Da
IEP (calculated)
9.138
GRAVY (calculated)
-0.526
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAGGPDDED NNRWPPWLKP LLKESFFVQC KLHADSHKSE CNMYCLDCMN GALCSLCLAY HKDHRAIQIR RSSYHDVIRV NEIQKVLDIT GVQTYIINSA
101: RVVFLNERPQ PRPGKGVTNT CEVCERSLLD SYRFCSLGCK IVGTSRNFLK KKSAAMVSDS EDSYSSNSSH GKKNSFTPST PPPTFVNYRT AKRRKGIPHR
201: APMGGLVIEY
101: RVVFLNERPQ PRPGKGVTNT CEVCERSLLD SYRFCSLGCK IVGTSRNFLK KKSAAMVSDS EDSYSSNSSH GKKNSFTPST PPPTFVNYRT AKRRKGIPHR
201: APMGGLVIEY
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.