CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0233g00100.t01	Wine grape	cytosol	36.63	65.44
VIT_02s0154g00150.t01	Wine grape	nucleus	48.56	48.36
KRH58510	Soybean	nucleus	37.45	45.73
KRG88921	Soybean	nucleus	44.86	45.04
KRH42391	Soybean	nucleus	37.04	45.0
GSMUA_Achr11P...	Banana	cytosol	42.8	44.64
KRH37851	Soybean	nucleus	40.74	41.42
KRH12861	Soybean	nucleus	40.33	41.0
Bra007550.1-P	Field mustard	extracellular, nucleus, vacuole	38.68	40.87
CDY41149	Canola	cytosol, extracellular, nucleus	38.68	40.87
CDX71792	Canola	cytosol	40.33	40.33
KRH20236	Soybean	nucleus	40.74	40.08
KRH75326	Soybean	extracellular, plasma membrane	45.68	40.07
Bra014478.1-P	Field mustard	cytosol	40.74	39.92
CDX89067	Canola	cytosol	40.74	39.92
CDY48369	Canola	cytosol	40.74	39.76
AT3G60670.1	Thale cress	cytosol	39.92	39.59
KRH03576	Soybean	nucleus	40.33	39.52
KRH12195	Soybean	cytosol	38.68	36.86
KRH37216	Soybean	cytosol	38.68	36.43
KRH19979	Soybean	cytosol	29.22	33.97
KRH75604	Soybean	nucleus	28.4	32.86
KRH13451	Soybean	cytosol	13.17	32.65
KRH32606	Soybean	extracellular	28.4	31.08
KRG96080	Soybean	cytosol	27.98	31.05
KRH27687	Soybean	cytosol	29.63	30.9
KRH25132	Soybean	cytosol	27.57	30.45
KRH67792	Soybean	cytosol, nucleus, plasma membrane	27.57	30.32
KRH39550	Soybean	nucleus	28.81	29.66
KRH74408	Soybean	nucleus	28.81	29.66
KRH24008	Soybean	cytosol	27.16	29.6
KRH29309	Soybean	cytoskeleton, cytosol, nucleus	26.75	29.15
KRH72960	Soybean	nucleus	11.93	28.71
KRH30543	Soybean	nucleus	20.58	27.78
KRH77790	Soybean	nucleus	28.4	27.49
KRH49692	Soybean	nucleus	24.69	26.67
KRH60448	Soybean	nucleus	24.69	25.21
KRH41746	Soybean	nucleus	24.69	25.21
KRH45433	Soybean	plastid	18.93	19.66

Protein Annotations

EMBL:ACUP02006738	EnsemblPlants:KRH28037	EnsemblPlantsGene:GLYMA_11G030900	EntrezGene:100806286	InterPro:DUF597	PANTHER:PTHR31065
PANTHER:PTHR31065:SF1	PFAM:PF04640	ProteinID:KRH28037	ProteinID:KRH28037.1	SEG:seg	UniParc:UPI00023CDC1F
UniProt:K7LMR9	MapMan:15.5.43	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:2234577..2236306

Molecular Weight (calculated)

27811.4 Da

IEP (calculated)

8.675

GRAVY (calculated)

-0.386

Length

243 amino acids

Sequence
(BLAST)

001: MVGFNSVPNW LLILKEEKFF TRCLIHHSVK KNEKNIFCLD CCTSICLHCL PFHRSHVLLQ IRRYMYNDVL RLGDAQTLLN CSLVQPYTTN KTKVVFLKQR
101: PPTGSHRGSS NICITCDRNL QDPYIFCSVS CKVHQHVLLI TKSTSIKDTW NKHEFSVLLD KERSSENHQE IEDSQITTDS VLDSHSPTST SLCTVSGSTS
201: TNSGSVTENE SLKKKRGSVD MVPEIWYTMV NRRKGVPHRS PFY

Best Arabidopsis Sequence Match ( AT1G31040.1 )
(BLAST)

001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.