Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03576 | Soybean | nucleus | 98.38 | 97.98 |
| KRH12861 | Soybean | nucleus | 87.45 | 90.38 |
| KRH37851 | Soybean | nucleus | 87.04 | 89.96 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 84.21 | 84.9 |
| Solyc12g010470.1.1 | Tomato | cytosol | 73.68 | 73.98 |
| PGSC0003DMT400020401 | Potato | cytosol | 73.28 | 73.58 |
| Solyc07g007320.1.1 | Tomato | cytosol | 75.3 | 72.94 |
| KXG29636 | Sorghum | nucleus | 68.42 | 71.31 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 68.02 | 70.89 |
| Zm00001d015560_P001 | Maize | nucleus | 67.61 | 70.46 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 67.21 | 70.04 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 67.21 | 70.04 |
| HORVU6Hr1G028520.1 | Barley | cytosol, extracellular, nucleus | 67.21 | 70.04 |
| AT2G12646.1 | Thale cress | nucleus | 72.06 | 69.53 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 66.4 | 69.2 |
| CDY37203 | Canola | cytosol | 68.42 | 66.27 |
| Bra037203.1-P | Field mustard | cytosol | 68.42 | 66.27 |
| CDX81439 | Canola | cytosol | 68.42 | 66.02 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 64.37 | 64.11 |
| Bra013149.1-P | Field mustard | cytosol | 71.26 | 63.54 |
| CDX93111 | Canola | cytosol | 71.26 | 63.54 |
| CDX89603 | Canola | cytosol | 70.85 | 63.18 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 59.92 | 59.2 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 66.8 | 58.1 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 65.18 | 56.49 |
| KRH58510 | Soybean | nucleus | 42.51 | 52.76 |
| KRH42391 | Soybean | nucleus | 42.51 | 52.5 |
| KRG88921 | Soybean | nucleus | 47.37 | 48.35 |
| KRH37216 | Soybean | cytosol | 45.75 | 43.8 |
| KRH75326 | Soybean | extracellular, plasma membrane | 48.58 | 43.32 |
| KRH12195 | Soybean | cytosol | 44.53 | 43.14 |
| KRH28037 | Soybean | cytosol, nucleus, plastid | 40.08 | 40.74 |
| KRH19979 | Soybean | cytosol | 31.58 | 37.32 |
| KRG96080 | Soybean | cytosol | 31.98 | 36.07 |
| KRH32606 | Soybean | extracellular | 31.98 | 35.59 |
| KRH75604 | Soybean | nucleus | 29.96 | 35.24 |
| KRH72960 | Soybean | nucleus | 14.17 | 34.65 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 30.77 | 34.39 |
| KRH25132 | Soybean | cytosol | 30.36 | 34.09 |
| KRH13451 | Soybean | cytosol | 13.36 | 33.67 |
| KRH24008 | Soybean | cytosol | 30.36 | 33.63 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 29.96 | 33.18 |
| KRH74408 | Soybean | nucleus | 30.77 | 32.2 |
| KRH39550 | Soybean | nucleus | 30.77 | 32.2 |
| KRH27687 | Soybean | cytosol | 30.36 | 32.19 |
| KRH30543 | Soybean | nucleus | 22.27 | 30.56 |
| KRH77790 | Soybean | nucleus | 30.77 | 30.28 |
| KRH49692 | Soybean | nucleus | 24.29 | 26.67 |
| KRH60448 | Soybean | nucleus | 23.08 | 23.95 |
| KRH41746 | Soybean | nucleus | 23.08 | 23.95 |
| KRH45433 | Soybean | plastid | 22.27 | 23.5 |
Protein Annotations
| EMBL:ACUP02008249 | EnsemblPlants:KRH20236 | EnsemblPlantsGene:GLYMA_13G164800 | EntrezGene:100781564 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 |
| InterPro:Znf_B-box | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF11 | PFAM:PF04640 | PFscan:PS50119 | ProteinID:KRH20236 |
| ProteinID:KRH20236.1 | SEG:seg | UniParc:UPI000233B4F9 | UniProt:I1LZV9 | MapMan:15.5.43 | : |
Description
hypothetical protein
Coordinates
chr13:-:27967025..27969167
Molecular Weight (calculated)
28298.0 Da
IEP (calculated)
8.343
GRAVY (calculated)
-0.472
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMGHQKPAW LEALYTQKFF VGCSYHENAK KNEKNVFCLD CCTSICPHCL PSHRFHRLLQ VRRYVYHDVV RLEDLQKLID CSNVQAYTIN SAKVVFIKKR
101: PQNRQFKGSG NYCTSCDRSL QEPFIHCSLG CKVDFVLKHY KDLSPYLRTC NSLQLSPDFL IPQDMGDEEM TRSTVVDCDE PMSSSSGSSE SENNMSMMAC
201: TEIVRKRRSG WSTVCAKFMA NSNKVSDEDM ATSMSRRKGI PHRSPLC
101: PQNRQFKGSG NYCTSCDRSL QEPFIHCSLG CKVDFVLKHY KDLSPYLRTC NSLQLSPDFL IPQDMGDEEM TRSTVVDCDE PMSSSSGSSE SENNMSMMAC
201: TEIVRKRRSG WSTVCAKFMA NSNKVSDEDM ATSMSRRKGI PHRSPLC
001: MGIQKPAWLD ALYAEKFFVG CPYHETAKKN ERNVCCLDCC TSLCPHCVPS HRFHRLLQVR RYVYHDVVRL EDLQKLIDCS NVQAYTINSA KVVFIKKRPQ
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.