Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37203 | Canola | cytosol | 87.5 | 87.84 |
| Bra037203.1-P | Field mustard | cytosol | 87.5 | 87.84 |
| CDX81439 | Canola | cytosol | 87.5 | 87.5 |
| CDX93111 | Canola | cytosol | 89.06 | 82.31 |
| Bra013149.1-P | Field mustard | cytosol | 89.06 | 82.31 |
| CDX89603 | Canola | cytosol | 88.67 | 81.95 |
| KRH12861 | Soybean | nucleus | 67.58 | 72.38 |
| KRH37851 | Soybean | nucleus | 67.58 | 72.38 |
| KRH03576 | Soybean | nucleus | 69.92 | 72.18 |
| KRH20236 | Soybean | nucleus | 69.53 | 72.06 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 66.02 | 68.98 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 61.72 | 66.67 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 61.72 | 66.67 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 61.72 | 66.67 |
| HORVU6Hr1G028520.1 | Barley | cytosol, extracellular, nucleus | 61.72 | 66.67 |
| Solyc07g007320.1.1 | Tomato | cytosol | 66.02 | 66.27 |
| Solyc12g010470.1.1 | Tomato | cytosol | 63.67 | 66.26 |
| PGSC0003DMT400020401 | Potato | cytosol | 63.28 | 65.85 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 60.94 | 65.82 |
| KXG29636 | Sorghum | nucleus | 60.16 | 64.98 |
| Zm00001d015560_P001 | Maize | nucleus | 60.16 | 64.98 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 58.59 | 60.48 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 53.91 | 55.2 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 60.55 | 54.58 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 57.42 | 51.58 |
| AT3G60670.1 | Thale cress | cytosol | 43.36 | 45.31 |
| AT1G31040.1 | Thale cress | nucleus | 41.02 | 43.21 |
| AT1G32700.1 | Thale cress | cytosol | 30.08 | 36.15 |
| AT4G17900.1 | Thale cress | nucleus | 30.08 | 33.92 |
| AT1G43000.2 | Thale cress | cytosol | 27.34 | 31.39 |
| AT1G76590.1 | Thale cress | cytosol | 29.3 | 30.61 |
| AT1G21000.1 | Thale cress | cytosol | 29.3 | 30.49 |
| AT5G46710.1 | Thale cress | nucleus | 26.56 | 30.09 |
| AT2G01818.1 | Thale cress | nucleus | 24.61 | 28.38 |
| AT2G27930.5 | Thale cress | plastid | 19.14 | 25.52 |
Protein Annotations
| MapMan:15.5.43 | EntrezGene:3768403 | UniProt:A0A178W1S1 | ProteinID:AEC06206.1 | ProteinID:ANM62409.1 | ArrayExpress:AT2G12646 |
| EnsemblPlantsGene:AT2G12646 | RefSeq:AT2G12646 | TAIR:AT2G12646 | RefSeq:AT2G12646-TAIR-G | EnsemblPlants:AT2G12646.1 | TAIR:AT2G12646.1 |
| EMBL:DQ487530 | InterPro:DUF597 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0008150 | RefSeq:NP_001031352.1 | RefSeq:NP_001324567.1 | ProteinID:OAP11062.1 | ProteinID:OAP11064.1 | PFAM:PF04640 |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF11 | UniProt:Q1G3Q4 | UniParc:UPI00005DBFE7 | SEG:seg | : |
Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q4]
Coordinates
chr2:-:5166984..5169303
Molecular Weight (calculated)
28850.4 Da
IEP (calculated)
8.201
GRAVY (calculated)
-0.412
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIQKPAWLD ALYAEKFFVG CPYHETAKKN ERNVCCLDCC TSLCPHCVPS HRFHRLLQVR RYVYHDVVRL EDLQKLIDCS NVQAYTINSA KVVFIKKRPQ
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.