Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015731.1-P | Field mustard | nucleus | 87.35 | 89.92 |
| CDX87583 | Canola | nucleus | 86.94 | 89.5 |
| CDX88300 | Canola | nucleus | 86.53 | 89.45 |
| CDX68093 | Canola | nucleus | 85.71 | 87.87 |
| CDX85958 | Canola | nucleus | 85.31 | 83.6 |
| AT1G21000.1 | Thale cress | cytosol | 81.63 | 81.3 |
| Bra003715.1-P | Field mustard | nucleus | 53.06 | 78.79 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 52.65 | 70.11 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 52.24 | 63.37 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.84 | 62.87 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 57.96 | 62.56 |
| AT1G43000.2 | Thale cress | cytosol | 49.8 | 54.71 |
| Os06t0624900-01 | Rice | cytosol | 53.88 | 52.17 |
| TraesCS7A01G394800.1 | Wheat | cytosol | 51.43 | 52.07 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 51.43 | 52.07 |
| AT1G32700.1 | Thale cress | cytosol | 44.9 | 51.64 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 50.61 | 51.24 |
| HORVU7Hr1G093120.4 | Barley | cytosol | 49.8 | 51.05 |
| OQU76729 | Sorghum | cytosol, plastid | 52.65 | 50.39 |
| AT4G17900.1 | Thale cress | nucleus | 44.49 | 48.02 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 60.82 | 45.29 |
| AT5G46710.1 | Thale cress | nucleus | 40.41 | 43.81 |
| AT2G27930.5 | Thale cress | plastid | 31.84 | 40.62 |
| CDY06424 | Canola | cytosol | 37.14 | 39.91 |
| AT1G31040.1 | Thale cress | nucleus | 30.2 | 30.45 |
| AT2G12646.1 | Thale cress | nucleus | 30.61 | 29.3 |
| AT3G60670.1 | Thale cress | cytosol | 27.35 | 27.35 |
| AT2G01818.1 | Thale cress | nucleus | 22.86 | 25.23 |
Protein Annotations
| MapMan:15.5.43 | EntrezGene:843992 | UniProt:A0A178WMM6 | ProteinID:AEE35862.1 | ArrayExpress:AT1G76590 | EnsemblPlantsGene:AT1G76590 |
| RefSeq:AT1G76590 | TAIR:AT1G76590 | RefSeq:AT1G76590-TAIR-G | EnsemblPlants:AT1G76590.1 | TAIR:AT1G76590.1 | EMBL:BT024468 |
| InterPro:DUF597 | GO:GO:0008150 | RefSeq:NP_565135.1 | ProteinID:OAP19527.1 | PFAM:PF04640 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001185 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF12 | UniProt:Q2HIW3 | UniParc:UPI00001632D3 |
Description
At1g76590 [Source:UniProtKB/TrEMBL;Acc:Q2HIW3]
Coordinates
chr1:+:28740540..28742231
Molecular Weight (calculated)
27781.3 Da
IEP (calculated)
8.751
GRAVY (calculated)
-0.476
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPMMMRAEE DNYNLNPPPW LIPMLRANYF IPCSIHAASN KSECNMFCLD CSSEAFCSYC LLNHRNHRVL QIRRSSYHNV VRVNEIQKYI DISCVQTYII
101: NSARIVFLNE RPQPRIGKGV TNTCEICCRS LLDSFRFCSL GCKLGGMKRD PSLTFSLRGK HGREYEGEWE SDEATTPTKI RKTCAFNRLM SGLSISTVKC
201: DYLSGDQPSS SSGDESGFKL SPGTPPIYNH RNSSRRKGVP HRAPF
101: NSARIVFLNE RPQPRIGKGV TNTCEICCRS LLDSFRFCSL GCKLGGMKRD PSLTFSLRGK HGREYEGEWE SDEATTPTKI RKTCAFNRLM SGLSISTVKC
201: DYLSGDQPSS SSGDESGFKL SPGTPPIYNH RNSSRRKGVP HRAPF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.