Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035494.1-P | Field mustard | nucleus | 91.08 | 88.58 |
| KRH75604 | Soybean | nucleus | 73.71 | 74.76 |
| Bra023280.1-P | Field mustard | mitochondrion | 92.49 | 69.61 |
| PGSC0003DMT400045164 | Potato | nucleus | 74.18 | 69.6 |
| KRH74408 | Soybean | nucleus | 76.06 | 68.64 |
| Solyc08g076860.2.1 | Tomato | nucleus | 73.24 | 68.42 |
| KRH39550 | Soybean | nucleus | 75.59 | 68.22 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 90.61 | 67.96 |
| PGSC0003DMT400046007 | Potato | cytosol | 70.42 | 66.96 |
| PGSC0003DMT400019836 | Potato | nucleus | 69.95 | 66.82 |
| Solyc06g061240.2.1 | Tomato | nucleus | 69.48 | 66.07 |
| CDY44664 | Canola | plasma membrane | 91.08 | 65.99 |
| AT4G17900.1 | Thale cress | nucleus | 68.54 | 64.32 |
| Solyc08g005100.2.1 | Tomato | cytosol | 67.61 | 64.29 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 75.12 | 61.07 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 68.54 | 58.87 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 68.08 | 58.23 |
| Os04t0591100-01 | Rice | nucleus | 68.08 | 58.23 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 66.67 | 57.72 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 66.67 | 57.72 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 66.2 | 57.32 |
| Os02t0692700-01 | Rice | nucleus | 68.08 | 56.42 |
| EES12755 | Sorghum | nucleus | 66.2 | 56.18 |
| KXG30975 | Sorghum | nucleus | 65.73 | 55.56 |
| Zm00001d002489_P001 | Maize | nucleus | 66.2 | 55.08 |
| Zm00001d017682_P001 | Maize | nucleus | 64.79 | 54.76 |
| Zm00001d026047_P002 | Maize | nucleus | 64.79 | 54.55 |
| Zm00001d051511_P001 | Maize | nucleus | 62.44 | 52.99 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 68.08 | 52.73 |
| AT5G46710.1 | Thale cress | nucleus | 53.99 | 50.88 |
| AT1G21000.1 | Thale cress | cytosol | 55.4 | 47.97 |
| AT1G76590.1 | Thale cress | cytosol | 51.64 | 44.9 |
| AT1G43000.2 | Thale cress | cytosol | 46.01 | 43.95 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 70.42 | 41.21 |
| AT2G27930.5 | Thale cress | plastid | 36.15 | 40.1 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 58.22 | 38.63 |
| AT3G60670.1 | Thale cress | cytosol | 35.21 | 30.61 |
| AT2G12646.1 | Thale cress | nucleus | 36.15 | 30.08 |
| AT1G31040.1 | Thale cress | nucleus | 34.27 | 30.04 |
| AT2G01818.1 | Thale cress | nucleus | 30.05 | 28.83 |
Protein Annotations
| MapMan:15.5.43 | EntrezGene:840164 | ProteinID:AEE31518.1 | ArrayExpress:AT1G32700 | EnsemblPlantsGene:AT1G32700 | RefSeq:AT1G32700 |
| TAIR:AT1G32700 | RefSeq:AT1G32700-TAIR-G | EnsemblPlants:AT1G32700.1 | TAIR:AT1G32700.1 | InterPro:DUF597 | UniProt:F4IEB6 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | RefSeq:NP_564406.1 | PFAM:PF04640 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31065 |
| PANTHER:PTHR31065:SF8 | UniParc:UPI0000162F58 | SEG:seg | : | : | : |
Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
Coordinates
chr1:+:11827359..11829933
Molecular Weight (calculated)
24316.2 Da
IEP (calculated)
9.462
GRAVY (calculated)
-0.520
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.