Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017682_P001 | Maize | nucleus | 85.26 | 84.92 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 79.28 | 79.92 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 78.49 | 79.44 |
| KRH75604 | Soybean | nucleus | 61.35 | 73.33 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 78.09 | 71.27 |
| Zm00001d002489_P001 | Maize | nucleus | 70.92 | 69.53 |
| KRH74408 | Soybean | nucleus | 64.54 | 68.64 |
| KRH39550 | Soybean | nucleus | 64.14 | 68.22 |
| Zm00001d026047_P002 | Maize | nucleus | 68.53 | 67.98 |
| PGSC0003DMT400045164 | Potato | nucleus | 59.36 | 65.64 |
| Solyc08g076860.2.1 | Tomato | nucleus | 58.96 | 64.91 |
| PGSC0003DMT400019836 | Potato | nucleus | 56.97 | 64.13 |
| Solyc06g061240.2.1 | Tomato | nucleus | 56.97 | 63.84 |
| CDY01500 | Canola | nucleus | 54.18 | 63.55 |
| Bra012632.1-P | Field mustard | nucleus | 53.78 | 63.08 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 57.77 | 62.77 |
| CDX90437 | Canola | nucleus | 53.39 | 62.62 |
| AT1G32700.1 | Thale cress | cytosol | 52.99 | 62.44 |
| KRH24008 | Soybean | cytosol | 55.38 | 62.33 |
| KRH27687 | Soybean | cytosol | 57.77 | 62.23 |
| AT4G17900.1 | Thale cress | nucleus | 55.38 | 61.23 |
| CDY44504 | Canola | nucleus | 55.38 | 61.23 |
| CDX78810 | Canola | nucleus | 55.38 | 61.23 |
| Bra035494.1-P | Field mustard | nucleus | 53.39 | 61.19 |
| CDY08880 | Canola | nucleus | 54.58 | 61.16 |
| PGSC0003DMT400046007 | Potato | cytosol | 54.58 | 61.16 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 63.35 | 60.69 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 53.78 | 60.54 |
| Bra021029.1-P | Field mustard | nucleus | 53.78 | 60.27 |
| CDX76551 | Canola | nucleus | 53.78 | 60.27 |
| Bra013266.1-P | Field mustard | nucleus | 54.18 | 59.91 |
| Solyc08g005100.2.1 | Tomato | cytosol | 52.99 | 59.38 |
| KRH77790 | Soybean | nucleus | 57.37 | 57.37 |
| CDY35177 | Canola | nucleus | 51.79 | 56.77 |
| Bra025003.1-P | Field mustard | nucleus | 51.0 | 56.64 |
| CDY69910 | Canola | nucleus | 51.0 | 56.64 |
| CDY03199 | Canola | nucleus | 50.6 | 56.44 |
| Bra017531.1-P | Field mustard | nucleus | 51.39 | 56.33 |
| CDY69918 | Canola | nucleus | 50.6 | 56.19 |
| CDY66745 | Canola | nucleus | 48.21 | 54.26 |
| Bra022055.1-P | Field mustard | nucleus | 48.21 | 54.26 |
| Zm00001d030032_P002 | Maize | nucleus | 54.18 | 53.54 |
| CDY72135 | Canola | cytosol, nucleus | 45.42 | 53.02 |
| Zm00001d047025_P001 | Maize | nucleus | 54.98 | 52.87 |
| CDX87686 | Canola | nucleus | 48.61 | 52.81 |
| Bra022058.1-P | Field mustard | nucleus | 47.41 | 51.97 |
| CDX87684 | Canola | nucleus | 47.81 | 51.06 |
| Bra023280.1-P | Field mustard | mitochondrion | 55.78 | 49.47 |
| AT5G46710.1 | Thale cress | nucleus | 44.22 | 49.12 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 54.58 | 48.24 |
| CDY44664 | Canola | plasma membrane | 54.58 | 46.6 |
| Zm00001d031925_P001 | Maize | cytosol | 37.85 | 44.81 |
| Zm00001d009292_P001 | Maize | extracellular | 36.26 | 42.52 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 54.18 | 42.37 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 47.81 | 32.97 |
| Zm00001d015560_P001 | Maize | nucleus | 29.88 | 31.65 |
| Zm00001d015868_P001 | Maize | nucleus | 26.69 | 31.16 |
| Zm00001d046958_P001 | Maize | nucleus | 30.68 | 30.8 |
| Zm00001d015394_P001 | Maize | cytosol | 31.47 | 29.92 |
| Zm00001d051376_P001 | Maize | cytosol | 23.51 | 29.8 |
Protein Annotations
| EMBL:KJ728374 | EnsemblPlants:Zm00001d051511_P001 | EnsemblPlants:Zm00001d051511_T001 | EnsemblPlantsGene:Zm00001d051511 | EntrezGene:100278779 | InterPro:DUF597 |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 | PFAM:PF04640 | ProteinID:AQK54419.1 | SEG:seg | UniParc:UPI00022200B3 |
| UniProt:K7UYB0 | MapMan:15.5.43 | : | : | : | : |
Description
PLATZ-transcription factor 7PLATZ transcription factor family protein
Coordinates
chr4:-:160984327..160986154
Molecular Weight (calculated)
27141.5 Da
IEP (calculated)
9.805
GRAVY (calculated)
-0.478
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHATPLG LKRRGAMGGG GECDDGSDTR RWPPWLRPLL SASFFVQCRV HADAHKSECN MYCLDCMGGA LCALCLAARH RDHHSIQIRR SSYHDVIRVS
101: EIQKVLDIAG VQTYIINSAR VVFLNERPQP RPGKGVTNTC EVCERSLLDC FRFCSLGCKI VGTARGYRPG KKKHGGGGGN KKRASPAPAL KDVRSDSEDS
201: CTSTSGASSD KSSVVQSSPP PPTSASHRPP GNKRRKGIPH RSPLGSLIVE L
101: EIQKVLDIAG VQTYIINSAR VVFLNERPQP RPGKGVTNTC EVCERSLLDC FRFCSLGCKI VGTARGYRPG KKKHGGGGGN KKRASPAPAL KDVRSDSEDS
201: CTSTSGASSD KSSVVQSSPP PPTSASHRPP GNKRRKGIPH RSPLGSLIVE L
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.