Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91885 | Sorghum | nucleus | 88.51 | 88.85 |
| Zm00001d030032_P002 | Maize | nucleus | 83.91 | 86.22 |
| Os10t0574700-01 | Rice | nucleus | 72.8 | 74.8 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 70.5 | 71.6 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 69.35 | 68.05 |
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 70.11 | 67.78 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 54.79 | 55.86 |
| Zm00001d051511_P001 | Maize | nucleus | 52.87 | 54.98 |
| Zm00001d017682_P001 | Maize | nucleus | 52.11 | 53.97 |
| Zm00001d026047_P002 | Maize | nucleus | 51.72 | 53.36 |
| Zm00001d002489_P001 | Maize | nucleus | 52.11 | 53.12 |
| HORVU1Hr1G050480.5 | Barley | cytosol, nucleus | 62.07 | 51.76 |
| KRH13451 | Soybean | cytosol | 18.39 | 48.98 |
| Zm00001d031925_P001 | Maize | cytosol | 36.4 | 44.81 |
| Zm00001d009292_P001 | Maize | extracellular | 34.1 | 41.59 |
| KRH45433 | Soybean | plastid | 34.87 | 38.89 |
| Zm00001d015868_P001 | Maize | nucleus | 27.59 | 33.49 |
| Zm00001d015560_P001 | Maize | nucleus | 26.44 | 29.11 |
| Zm00001d046958_P001 | Maize | nucleus | 27.59 | 28.8 |
| Zm00001d051376_P001 | Maize | cytosol | 21.46 | 28.28 |
| Zm00001d015394_P001 | Maize | cytosol | 28.35 | 28.03 |
Protein Annotations
| EMBL:EU975934 | EnsemblPlants:Zm00001d047025_P001 | EnsemblPlants:Zm00001d047025_T001 | EnsemblPlantsGene:Zm00001d047025 | EntrezGene:100278906 | InterPro:DUF597 |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF13 | PFAM:PF04640 | ProteinID:AQL05396.1 | SEG:seg | UniParc:UPI000182FBAB |
| UniProt:B6UFB9 | MapMan:15.5.43 | : | : | : | : |
Description
PLATZ-transcription factor 13PLATZ transcription factor family protein
Coordinates
chr9:+:115708968..115711076
Molecular Weight (calculated)
28489.6 Da
IEP (calculated)
8.499
GRAVY (calculated)
-0.493
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHESPFK ELRLKNRRIM GGGGPDPEPE EEEEEGVTAA YAERWPRWLQ PLLSARFFAQ CRTHSDSNRS GECNMFCLDC SAAGGTGTGA GALCSLCLAQ
101: HGHRDHHTIQ IRRSSYHDVI RVSDIQRFMD IAGVQTYVIN SARVVFLNER PQQQKPGGGK AASSSSASAN LCEVCARSLL DNFRFCSLGC KVVGCSPDAA
201: KARNWLLRAA DGDGSTTSSS APRNADRKLS FTPPTPQPTL PTKRRKGIPH RAPFGSLIVE Y
101: HGHRDHHTIQ IRRSSYHDVI RVSDIQRFMD IAGVQTYVIN SARVVFLNER PQQQKPGGGK AASSSSASAN LCEVCARSLL DNFRFCSLGC KVVGCSPDAA
201: KARNWLLRAA DGDGSTTSSS APRNADRKLS FTPPTPQPTL PTKRRKGIPH RAPFGSLIVE Y
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.