Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90181 | Sorghum | cytosol | 90.4 | 91.5 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 76.4 | 75.2 |
| Os06t0666100-01 | Rice | nucleus | 78.4 | 75.1 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 76.0 | 74.51 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 76.0 | 74.22 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 74.4 | 73.23 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 65.6 | 72.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 63.2 | 70.85 |
| Zm00001d015394_P001 | Maize | cytosol | 72.8 | 68.94 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 61.6 | 63.37 |
| CDX98234 | Canola | cytosol | 39.6 | 57.56 |
| KRH42391 | Soybean | nucleus | 45.6 | 57.0 |
| Solyc02g068510.1.1 | Tomato | cytosol | 54.0 | 56.02 |
| KRH58510 | Soybean | nucleus | 43.6 | 54.77 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 54.8 | 52.49 |
| AT1G31040.1 | Thale cress | nucleus | 50.8 | 52.26 |
| CDY27171 | Canola | nucleus | 49.6 | 51.67 |
| CDY12444 | Canola | nucleus | 49.6 | 51.67 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 49.6 | 51.67 |
| Bra014899.1-P | Field mustard | nucleus | 50.0 | 50.81 |
| CDY02353 | Canola | mitochondrion, nucleus | 37.6 | 50.81 |
| KRH12195 | Soybean | cytosol | 50.8 | 49.8 |
| KRH37216 | Soybean | cytosol | 51.2 | 49.61 |
| CDY43172 | Canola | nucleus | 38.4 | 47.76 |
| Zm00001d015560_P001 | Maize | nucleus | 44.0 | 46.41 |
| Zm00001d051376_P001 | Maize | cytosol | 26.0 | 32.83 |
| Zm00001d031925_P001 | Maize | cytosol | 27.6 | 32.55 |
| Zm00001d051511_P001 | Maize | nucleus | 30.8 | 30.68 |
| Zm00001d009292_P001 | Maize | extracellular | 25.6 | 29.91 |
| Bra023155.1-P | Field mustard | nucleus | 38.4 | 29.54 |
| Zm00001d017682_P001 | Maize | nucleus | 29.2 | 28.97 |
| Zm00001d002489_P001 | Maize | nucleus | 29.6 | 28.91 |
| Zm00001d026047_P002 | Maize | nucleus | 28.8 | 28.46 |
| Zm00001d030032_P002 | Maize | nucleus | 28.8 | 28.35 |
| Zm00001d047025_P001 | Maize | nucleus | 28.8 | 27.59 |
| Zm00001d015868_P001 | Maize | nucleus | 20.0 | 23.26 |
Protein Annotations
| EnsemblPlants:Zm00001d046958_P001 | EnsemblPlants:Zm00001d046958_T001 | EnsemblPlantsGene:Zm00001d046958 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | PFAM:PF04640 | PFscan:PS50119 | ProteinID:AQL05250.1 | SEG:seg |
| UniParc:UPI00084301F2 | UniProt:A0A1D6P5N0 | MapMan:15.5.43 | : | : | : |
Description
PLATZ transcription factor family protein
Coordinates
chr9:-:113035703..113040261
Molecular Weight (calculated)
27177.6 Da
IEP (calculated)
8.381
GRAVY (calculated)
-0.314
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMRPGWVGG LVEESFFVGC AAHEDRKKNE KNIFCLGCCA SICPHCAPAH RHHLLLQVRR YVYNDVVRLD DLERLIDCSF VQPYTINSAK VIFLKPRPQS
101: RPFKGSGNVC LACDRILQEP FHFCCLSCKV DHVMMQGGDL SNILLYVPGG PPDLGCGFPR FENLRFDDDP GQYGQATPSS ILEDPVEHGG SASASGGSSN
201: GGSARNHARR DVDVPTRKKK SGGGGGGFFP QIVLSLGNRR KGAPHRAPLA
101: RPFKGSGNVC LACDRILQEP FHFCCLSCKV DHVMMQGGDL SNILLYVPGG PPDLGCGFPR FENLRFDDDP GQYGQATPSS ILEDPVEHGG SASASGGSSN
201: GGSARNHARR DVDVPTRKKK SGGGGGGFFP QIVLSLGNRR KGAPHRAPLA
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.