Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046958_P001 | Maize | nucleus | 91.5 | 90.4 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 78.95 | 76.77 |
| Os06t0666100-01 | Rice | nucleus | 80.57 | 76.25 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 78.54 | 76.08 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 78.54 | 75.78 |
| EES04603 | Sorghum | nucleus | 76.92 | 73.64 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 75.71 | 73.62 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 66.8 | 73.01 |
| GSMUA_AchrUn_... | Banana | nucleus | 64.37 | 71.3 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 62.35 | 63.37 |
| KRH42391 | Soybean | nucleus | 46.15 | 57.0 |
| CDX98234 | Canola | cytosol | 39.68 | 56.98 |
| Solyc02g068510.1.1 | Tomato | cytosol | 55.06 | 56.43 |
| KRH58510 | Soybean | nucleus | 44.13 | 54.77 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 56.68 | 53.64 |
| AT1G31040.1 | Thale cress | nucleus | 50.61 | 51.44 |
| CDY27171 | Canola | nucleus | 49.8 | 51.25 |
| CDY12444 | Canola | nucleus | 49.8 | 51.25 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 49.8 | 51.25 |
| CDY02353 | Canola | mitochondrion, nucleus | 38.06 | 50.81 |
| Bra014899.1-P | Field mustard | nucleus | 50.2 | 50.41 |
| KRH37216 | Soybean | cytosol | 51.42 | 49.22 |
| KRH12195 | Soybean | cytosol | 50.2 | 48.63 |
| CDY43172 | Canola | nucleus | 38.87 | 47.76 |
| KXG29636 | Sorghum | nucleus | 43.72 | 45.57 |
| OQU78879 | Sorghum | endoplasmic reticulum | 28.74 | 33.33 |
| EES15787 | Sorghum | endoplasmic reticulum | 28.34 | 32.71 |
| KXG25377 | Sorghum | extracellular | 27.94 | 32.7 |
| EES07500 | Sorghum | nucleus | 25.91 | 32.0 |
| OQU76729 | Sorghum | cytosol, plastid | 31.98 | 30.86 |
| KXG30975 | Sorghum | nucleus | 30.77 | 30.16 |
| Bra023155.1-P | Field mustard | nucleus | 38.46 | 29.23 |
| EER91885 | Sorghum | nucleus | 30.77 | 29.23 |
| OQU84555 | Sorghum | cytosol | 15.38 | 28.79 |
| EES12755 | Sorghum | nucleus | 29.15 | 28.69 |
| KXG29686 | Sorghum | cytosol | 19.43 | 25.13 |
| EES04679 | Sorghum | cytosol | 18.62 | 23.96 |
Protein Annotations
| EnsemblPlants:EER90181 | EnsemblPlantsGene:SORBI_3010G220800 | EntrezGene:8061584 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | PFAM:PF04640 | PFscan:PS50119 | ProteinID:EER90181 | ProteinID:EER90181.1 |
| RefSeq:XP_002438814.1 | SEG:seg | UniParc:UPI0001A89602 | UniProt:C5Z7M9 | MapMan:15.5.43 | : |
Description
hypothetical protein
Coordinates
chr10:-:56310472..56315161
Molecular Weight (calculated)
26783.2 Da
IEP (calculated)
8.497
GRAVY (calculated)
-0.308
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMRPGWVGG LVEESFFVGC AAHENRKKNE KNIFCLGCCA SICPHCAPAH RHHLLIQVRR YVYNDVVRLD DLERLIDCSF VQPYTINSAK VVFLKPRPQS
101: RPFKGSGNVC LTCDRILQEP FHFCCLSCKV DHVMMQGGGD LSNILYVPGG GGGGPPDLVG CGFPRFENLR FDDDPAAQYG GQVTPNSILE DPMQHGGSSS
201: GGSARNARRG DDVPTRKKSG GGGGFFPQIV LSLGNRRKGA PHRAPLA
101: RPFKGSGNVC LTCDRILQEP FHFCCLSCKV DHVMMQGGGD LSNILYVPGG GGGGPPDLVG CGFPRFENLR FDDDPAAQYG GQVTPNSILE DPMQHGGSSS
201: GGSARNARRG DDVPTRKKSG GGGGFFPQIV LSLGNRRKGA PHRAPLA
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.