CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G394800.1	Wheat	cytosol	80.08	84.71
TraesCS7D01G390300.1	Wheat	cytosol	80.08	84.71
TraesCS7B01G296800.1	Wheat	cytosol	78.91	83.47
HORVU7Hr1G093120.4	Barley	cytosol	77.34	82.85
Os06t0624900-01	Rice	cytosol	80.08	81.03
GSMUA_AchrUn_...	Banana	cytosol	51.56	65.35
GSMUA_Achr7P20650_001	Banana	cytosol	46.88	65.22
GSMUA_Achr6P36360_001	Banana	cytosol	50.78	64.36
GSMUA_Achr9P12280_001	Banana	cytosol	53.91	60.79
Bra012263.1-P	Field mustard	cytosol	46.48	59.8
CDY01340	Canola	cytosol	53.52	58.8
Bra025865.1-P	Field mustard	cytosol	55.08	57.79
CDY04591	Canola	cytosol	55.08	57.79
CDY29486	Canola	cytosol	55.08	57.79
AT1G21000.1	Thale cress	cytosol	55.08	57.32
CDY00356	Canola	cytosol	54.3	56.97
PGSC0003DMT400025721	Potato	plastid	38.67	56.9
Bra016441.1-P	Field mustard	cytosol	53.91	56.79
CDY33661	Canola	cytosol	53.52	56.38
Bra003715.1-P	Field mustard	nucleus	35.55	55.15
CDX88300	Canola	nucleus	50.0	54.01
CDX68093	Canola	nucleus	50.39	53.97
Bra015731.1-P	Field mustard	nucleus	50.0	53.78
CDX87583	Canola	nucleus	50.0	53.78
CDX96610	Canola	cytosol	54.69	53.03
AT1G76590.1	Thale cress	cytosol	50.39	52.65
CDX85958	Canola	nucleus	50.0	51.2
AT1G43000.2	Thale cress	cytosol	43.75	50.22
KXG25377	Sorghum	extracellular	37.11	45.02
EES15787	Sorghum	endoplasmic reticulum	37.11	44.39
OQU78879	Sorghum	endoplasmic reticulum	36.72	44.13
EES12755	Sorghum	nucleus	42.58	43.43
KXG30975	Sorghum	nucleus	42.19	42.86
EER91885	Sorghum	nucleus	40.62	40.0
VIT_18s0122g00320.t01	Wine grape	cytosol	50.78	39.51
OQU84555	Sorghum	cytosol	19.92	38.64
EES04679	Sorghum	cytosol	25.39	33.85
KXG29686	Sorghum	cytosol	25.0	33.51
EER90181	Sorghum	cytosol	30.86	31.98
EES04603	Sorghum	nucleus	32.03	31.78
KXG29636	Sorghum	nucleus	29.3	31.65
CDY06424	Canola	cytosol	27.73	31.14
EES07500	Sorghum	nucleus	23.05	29.5

Protein Annotations

EnsemblPlants:OQU76729	EnsemblPlantsGene:SORBI_3010G196500	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF12	PFAM:PF04640
ProteinID:OQU76729	ProteinID:OQU76729.1	SEG:seg	UniParc:UPI0009DC87C0	UniProt:A0A1W0VTW8	MapMan:15.5.43

Description

hypothetical protein

Coordinates

chr10:+:53970214..53975046

Molecular Weight (calculated)

28097.5 Da

IEP (calculated)

8.960

GRAVY (calculated)

-0.448

Length

256 amino acids

Sequence
(BLAST)

001: MVMVSVASPS PSPSPMVRSE EDLGPPWLRP LLGTSFFVPC RLHPELSKNE CNLFCLGCTG DALCAYCLPA HRDHHVVQIR RSSYHNVIRV SEVGKLIDIS
101: HVQTYVINSA KIVFLNGRPQ ARPGKGVTNT CEICCRSLPD SFRFCSLGCK LGGMQWDPSL TFAIRPKRGQ GSGDDGSGSD DDSFSPKKPR RMAGGFDLSR
201: FERPGIRWSD DEGSRSNITP PMNRCRPSRR KGIPHRAPFY GVSSESSDPK SSASGI

Best Arabidopsis Sequence Match ( AT1G21000.1 )
(BLAST)

001: MGPMIRTEEE EDYTSPPWLM PMLRGSYFVP CSIHVDSNKN ECNLFCLDCA GNAFCSYCLV KHKDHRVVQI RRSSYHNVVR VNEIQKFIDI ACVQTYIINS
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF

Arabidopsis Description

At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.