Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G394800.1 | Wheat | cytosol | 79.05 | 82.64 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 79.05 | 82.64 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 77.87 | 81.41 |
| HORVU7Hr1G093120.4 | Barley | cytosol | 76.28 | 80.75 |
| OQU76729 | Sorghum | cytosol, plastid | 81.03 | 80.08 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 48.62 | 66.85 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.36 | 66.83 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 52.57 | 65.84 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 55.73 | 62.11 |
| Bra012263.1-P | Field mustard | cytosol | 47.43 | 60.3 |
| CDY01340 | Canola | cytosol | 54.94 | 59.66 |
| Bra025865.1-P | Field mustard | cytosol | 56.52 | 58.61 |
| CDY29486 | Canola | cytosol | 56.52 | 58.61 |
| CDY04591 | Canola | cytosol | 56.52 | 58.61 |
| AT1G21000.1 | Thale cress | cytosol | 56.52 | 58.13 |
| CDY00356 | Canola | cytosol | 55.73 | 57.79 |
| Bra016441.1-P | Field mustard | cytosol | 55.34 | 57.61 |
| PGSC0003DMT400025721 | Potato | plastid | 39.53 | 57.47 |
| CDY33661 | Canola | cytosol | 54.94 | 57.2 |
| Bra003715.1-P | Field mustard | nucleus | 36.36 | 55.76 |
| CDX88300 | Canola | nucleus | 51.38 | 54.85 |
| CDX68093 | Canola | nucleus | 51.78 | 54.81 |
| CDX87583 | Canola | nucleus | 51.38 | 54.62 |
| Bra015731.1-P | Field mustard | nucleus | 51.38 | 54.62 |
| AT1G76590.1 | Thale cress | cytosol | 52.17 | 53.88 |
| CDX96610 | Canola | cytosol | 55.34 | 53.03 |
| CDX85958 | Canola | nucleus | 51.78 | 52.4 |
| AT1G43000.2 | Thale cress | cytosol | 44.27 | 50.22 |
| Os01t0517800-01 | Rice | extracellular | 30.83 | 45.61 |
| Os02t0692700-01 | Rice | nucleus | 45.85 | 45.14 |
| Os04t0591100-01 | Rice | nucleus | 43.87 | 44.58 |
| Os08t0560300-01 | Rice | cytosol | 35.18 | 44.5 |
| Os10t0574700-01 | Rice | nucleus | 44.66 | 44.49 |
| Os01t0518000-01 | Rice | cytosol | 35.97 | 41.94 |
| Os11t0428700-00 | Rice | cytosol | 20.95 | 40.46 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 49.41 | 37.99 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 30.43 | 32.49 |
| Os02t0172800-01 | Rice | cytosol | 30.83 | 32.37 |
| CDY06424 | Canola | cytosol | 28.06 | 31.14 |
| Os02t0661400-00 | Rice | cytosol | 27.27 | 30.53 |
| Os06t0666100-01 | Rice | nucleus | 30.83 | 29.89 |
Protein Annotations
| EMBL:AK065620 | EMBL:AK067251 | EnsemblPlants:Os06t0624900-01 | EnsemblPlantsGene:Os06g0624900 | EntrezGene:9268257 | InterPro:DUF597 |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF12 | PFAM:PF04640 | ProteinID:BAD35685.1 | ProteinID:BAS98690.1 | RefSeq:XP_015643502.1 |
| RefSeq:XP_015643503.1 | RefSeq:XP_015643504.1 | SEG:seg | UniParc:UPI0000403884 | UniProt:Q69TZ2 | MapMan:15.5.43 |
Description
Similar to zinc-binding family protein. (Os06t0624900-01);Similar to predicted protein. (Os06t0624900-02);Similar to zinc-binding family protein. (Os06t0624900-03)
Coordinates
chr6:+:25158369..25164529
Molecular Weight (calculated)
27618.8 Da
IEP (calculated)
8.553
GRAVY (calculated)
-0.454
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGMMETSPD DGGGGEAMAA AQQTEEDMGP PWLRPLLSTS FFVACASHPE LSKNECNLFC LGCTGDALCA YCLPAHRDHH VVQIRRSSYH NVIRVSEVGK
101: LIDISHVQTY VINSAKIVFL NGRPQARPGK GVTNTCEICC RSLPDSFRFC SLGCKLGGMR WDPSLTFAIR PKRGQDSGDG GSGSDYDSFS PKKARRAAAG
201: YDQLGRFDRG MIRWSDDEGS KSNTAPITPT TPPISRCRPS RRKGIPHRAP FYG
101: LIDISHVQTY VINSAKIVFL NGRPQARPGK GVTNTCEICC RSLPDSFRFC SLGCKLGGMR WDPSLTFAIR PKRGQDSGDG GSGSDYDSFS PKKARRAAAG
201: YDQLGRFDRG MIRWSDDEGS KSNTAPITPT TPPISRCRPS RRKGIPHRAP FYG
001: MIRTEEEEDY TSPPWLMPML RGSYFVPCSI HVDSNKNECN LFCLDCAGNA FCSYCLVKHK DHRVVQIRRS SYHNVVRVNE IQKFIDIACV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF
Arabidopsis Description
At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.