Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030032_P002 | Maize | nucleus | 73.23 | 73.23 |
| Zm00001d047025_P001 | Maize | nucleus | 74.8 | 72.8 |
| EER91885 | Sorghum | nucleus | 74.41 | 72.69 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 73.23 | 72.37 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 72.83 | 69.55 |
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 73.23 | 68.89 |
| Os02t0692700-01 | Rice | nucleus | 57.48 | 56.81 |
| Os04t0591100-01 | Rice | nucleus | 55.51 | 56.63 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 56.3 | 55.86 |
| HORVU1Hr1G050480.5 | Barley | cytosol, nucleus | 65.35 | 53.04 |
| KRH13451 | Soybean | cytosol | 19.68 | 51.02 |
| Os01t0517800-01 | Rice | extracellular | 32.28 | 47.95 |
| Os08t0560300-01 | Rice | cytosol | 35.83 | 45.5 |
| Os06t0624900-01 | Rice | cytosol | 44.49 | 44.66 |
| Os01t0518000-01 | Rice | cytosol | 35.04 | 41.01 |
| Os11t0428700-00 | Rice | cytosol | 20.47 | 39.69 |
| KRH45433 | Soybean | plastid | 36.22 | 39.32 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 27.56 | 29.54 |
| Os02t0661400-00 | Rice | cytosol | 25.59 | 28.76 |
| Os02t0172800-01 | Rice | cytosol | 26.77 | 28.22 |
| Os06t0666100-01 | Rice | nucleus | 27.95 | 27.2 |
Protein Annotations
| EMBL:AK240807 | EnsemblPlants:Os10t0574700-01 | EnsemblPlantsGene:Os10g0574700 | EntrezGene:4349481 | InterPro:DUF597 | PANTHER:PTHR31065 |
| PANTHER:PTHR31065:SF13 | PFAM:PF04640 | ProteinID:AAK00447.1 | ProteinID:ABB48016.2 | ProteinID:BAF27313.1 | ProteinID:BAT12186.1 |
| ProteinID:EAZ17068.1 | RefSeq:XP_015614789.1 | SEG:seg | UniParc:UPI00000AAA34 | UniProt:Q336P6 | MapMan:15.5.43 |
Description
Protein of unknown function DUF597 family protein. (Os10t0574700-01)
Coordinates
chr10:-:22829592..22831346
Molecular Weight (calculated)
27761.0 Da
IEP (calculated)
8.783
GRAVY (calculated)
-0.375
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHESPFK ELRLKNRRIM GGGGPEPEEE EAVAHGEQWP RWLSPLLSAS FFSQCKVHAD SHRSGECNMF CLDCAADADA AAAALCSLCL AHNHRDHHTI
101: QIRRSSYHDV IRVSDIQRFM DIGGVQTYVI NSARVVFLNE RPQHKAGKGA VANICEVCSR SLLDNFRFCS LGCKVVGCSP HAATAAATAT ATAARRKRLR
201: HAHAMASTSD SDNSTSPAKR SFTPSTPPPP PTLPPKRRKG IPHRAPFGSL IVEY
101: QIRRSSYHDV IRVSDIQRFM DIGGVQTYVI NSARVVFLNE RPQHKAGKGA VANICEVCSR SLLDNFRFCS LGCKVVGCSP HAATAAATAT ATAARRKRLR
201: HAHAMASTSD SDNSTSPAKR SFTPSTPPPP PTLPPKRRKG IPHRAPFGSL IVEY
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.