Factsheet for Os06t0666100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90181	Sorghum	cytosol	76.25	80.57
HORVU7Hr1G108680.1	Barley	nucleus	77.39	79.53
TraesCS7A01G479100.1	Wheat	nucleus	77.39	79.22
TraesCS7D01G466400.1	Wheat	nucleus	77.01	79.13
TraesCS7B01G381500.1	Wheat	nucleus	77.01	78.52
Zm00001d046958_P001	Maize	nucleus	75.1	78.4
GSMUA_Achr7P03600_001	Banana	nucleus	65.9	76.11
GSMUA_AchrUn_...	Banana	nucleus	64.75	75.78
Os02t0172800-01	Rice	cytosol	69.73	75.52
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	62.07	66.67
CDX98234	Canola	cytosol	39.46	59.88
Solyc02g068510.1.1	Tomato	cytosol	54.02	58.51
KRH42391	Soybean	nucleus	44.44	58.0
VIT_01s0011g01410.t01	Wine grape	nucleus	55.94	55.94
KRH58510	Soybean	nucleus	42.15	55.28
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	49.04	53.33
CDY12444	Canola	nucleus	49.04	53.33
AT1G31040.1	Thale cress	nucleus	49.43	53.09
CDY27171	Canola	nucleus	48.66	52.92
Bra014899.1-P	Field mustard	nucleus	49.43	52.44
KRH12195	Soybean	cytosol	50.19	51.37
CDY02353	Canola	mitochondrion, nucleus	36.4	51.35
KRH37216	Soybean	cytosol	50.57	51.16
CDY43172	Canola	nucleus	37.55	48.76
Os02t0183000-00	Rice	cytosol, extracellular, nucleus	42.53	46.84
Os01t0517800-01	Rice	extracellular	20.69	31.58
Os08t0560300-01	Rice	cytosol	24.14	31.5
Os06t0624900-01	Rice	cytosol	29.89	30.83
Bra023155.1-P	Field mustard	nucleus	38.31	30.77
Os02t0661400-00	Rice	cytosol	26.44	30.53
Os11t0428700-00	Rice	cytosol	14.94	29.77
Os04t0591100-01	Rice	nucleus	27.59	28.92
Os02t0692700-01	Rice	nucleus	28.35	28.79
Os01t0518000-01	Rice	cytosol	23.37	28.11
Os10t0574700-01	Rice	nucleus	27.2	27.95

Protein Annotations

MapMan:15.5.43	EntrezGene:4341780	EMBL:AK111793	ProteinID:BAD45396.1	ProteinID:BAD45399.1	ProteinID:BAF20221.1
ProteinID:BAS99034.1	InterPro:DUF597	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008270	InterPro:IPR000315	EnsemblPlantsGene:Os06g0666100	EnsemblPlants:Os06t0666100-01	PFAM:PF04640
PFscan:PS50119	PANTHER:PTHR31065	PANTHER:PTHR31065:SF32	UniProt:Q655W8	UniParc:UPI000043A29E	RefSeq:XP_015642081.1
InterPro:Znf_B-box	SEG:seg	:	:	:	:

Description

Protein of unknown function DUF597 family protein. (Os06t0666100-01)

Coordinates

chr6:+:27557239..27561598

Molecular Weight (calculated)

28339.7 Da

IEP (calculated)

8.042

GRAVY (calculated)

-0.454

Length

261 amino acids

Sequence
(BLAST)

001: MGMRPGWVGG LVEESFFVGC PAHESRKKNE KNIFCLGCCA SICPHCAPSH RHHPLLQVRR YVYNDVVRLD DLDKLIDCSF VQPYTINSAK VIFLKPRPQS
101: RPFKGSGNIC LTCDRILQEP FHFCCLSCKV DHVMMQGGDL SNILYMSGGS SGEPDLAAGF PRFENLRVDG GGGGGGGLSD DDDDHQVTTP NSILEDPLHH
201: HHHQYYGGGG SSNNGRSTSP APTTADVPRK KKSGGGGGFF PQIVLSLNNR RKGAPHRSPL A

Best Arabidopsis Sequence Match ( AT1G31040.1 )
(BLAST)

001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.