Factsheet for Os02t0172800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	67.63	73.09
GSMUA_Achr7P03600_001	Banana	nucleus	67.63	72.12
Os06t0666100-01	Rice	nucleus	75.52	69.73
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	61.0	60.49
CDX98234	Canola	cytosol	43.15	60.47
KRH42391	Soybean	nucleus	48.13	58.0
KRH58510	Soybean	nucleus	46.47	56.28
Solyc02g068510.1.1	Tomato	cytosol	55.19	55.19
VIT_01s0011g01410.t01	Wine grape	nucleus	57.68	53.26
CDY12444	Canola	nucleus	50.62	50.83
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	50.62	50.83
AT1G31040.1	Thale cress	nucleus	51.04	50.62
CDY27171	Canola	nucleus	50.21	50.42
Bra014899.1-P	Field mustard	nucleus	51.45	50.41
KRH12195	Soybean	cytosol	52.7	49.8
KRH37216	Soybean	cytosol	53.11	49.61
CDY02353	Canola	mitochondrion, nucleus	36.93	48.11
CDY43172	Canola	nucleus	38.17	45.77
Os02t0183000-00	Rice	cytosol, extracellular, nucleus	44.81	45.57
Os08t0560300-01	Rice	cytosol	26.97	32.5
Os01t0517800-01	Rice	extracellular	22.41	31.58
Os06t0624900-01	Rice	cytosol	32.37	30.83
Os11t0428700-00	Rice	cytosol	16.18	29.77
Os02t0661400-00	Rice	cytosol	27.8	29.65
Os04t0591100-01	Rice	nucleus	29.88	28.92
Os02t0692700-01	Rice	nucleus	30.71	28.79
Os01t0518000-01	Rice	cytosol	25.73	28.57
Bra023155.1-P	Field mustard	nucleus	38.17	28.31
Os10t0574700-01	Rice	nucleus	28.22	26.77

Protein Annotations

MapMan:15.5.43	EntrezGene:4328449	EMBL:AK103838	ProteinID:BAD25510.1	ProteinID:BAD26182.1	ProteinID:BAF07948.1
ProteinID:BAS77210.1	InterPro:DUF597	ProteinID:EAZ21911.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0008270	InterPro:IPR000315	EnsemblPlantsGene:Os02g0172800	EnsemblPlants:Os02t0172800-01
PFAM:PF04640	PFscan:PS50119	PANTHER:PTHR31065	PANTHER:PTHR31065:SF32	UniProt:Q6H517	UniParc:UPI00003B44A8
RefSeq:XP_015624889.1	InterPro:Znf_B-box	SEG:seg	:	:	:

Description

Similar to Zinc-binding protein. (Os02t0172800-01)

Coordinates

chr2:+:3971431..3975146

Molecular Weight (calculated)

25984.2 Da

IEP (calculated)

8.765

GRAVY (calculated)

-0.352

Length

241 amino acids

Sequence
(BLAST)

001: MGMRPGWVGG LVEESFFVGC PAHESRKKNE KNIFCLACCT SICPHCAPSH RHHPLLQVRR YVYNDVVRLG DLEKLIECSY VQPYTINSAK VIFLKPRPQS
101: RPFKGSGNVC LTCDRILQEP FHFCSLSCKV DHVMVHGGGD LSNIILLHPH HHPNTATASA FPRFEDLRVG ADDDAAAITA VTPEGRYGGG GGGSSDNGGG
201: DGGGGEVGEV KRKKKKGGGF FPQILGLGSR RKGAPHRSPL S

Best Arabidopsis Sequence Match ( AT1G31040.1 )
(BLAST)

001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.