Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014899.1-P | Field mustard | nucleus | 89.71 | 88.62 |
| CDX98234 | Canola | cytosol | 59.26 | 83.72 |
| KRH42391 | Soybean | nucleus | 51.85 | 63.0 |
| KRH58510 | Soybean | nucleus | 50.62 | 61.81 |
| KRH12195 | Soybean | cytosol | 63.79 | 60.78 |
| GSMUA_AchrUn_... | Banana | nucleus | 55.56 | 60.54 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 65.02 | 60.54 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 55.56 | 59.73 |
| KRH37216 | Soybean | cytosol | 63.37 | 59.69 |
| Solyc02g068510.1.1 | Tomato | cytosol | 58.85 | 59.34 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 48.56 | 55.66 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 51.03 | 54.39 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 53.91 | 53.91 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 41.98 | 53.4 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 52.26 | 52.26 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 51.44 | 51.44 |
| Os02t0172800-01 | Rice | cytosol | 50.62 | 51.04 |
| Zm00001d046958_P001 | Maize | nucleus | 52.26 | 50.8 |
| EER90181 | Sorghum | cytosol | 51.44 | 50.61 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 52.26 | 50.0 |
| EES04603 | Sorghum | nucleus | 53.09 | 50.0 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 52.26 | 49.8 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 52.26 | 49.61 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 51.85 | 49.61 |
| Os06t0666100-01 | Rice | nucleus | 53.09 | 49.43 |
| Zm00001d015394_P001 | Maize | cytosol | 52.26 | 48.11 |
| AT2G12646.1 | Thale cress | nucleus | 43.21 | 41.02 |
| AT3G60670.1 | Thale cress | cytosol | 38.68 | 38.37 |
| AT1G32700.1 | Thale cress | cytosol | 30.04 | 34.27 |
| AT1G43000.2 | Thale cress | cytosol | 30.86 | 33.63 |
| AT4G17900.1 | Thale cress | nucleus | 29.63 | 31.72 |
| AT5G46710.1 | Thale cress | nucleus | 28.81 | 30.97 |
| AT2G27930.5 | Thale cress | plastid | 23.87 | 30.21 |
| AT1G76590.1 | Thale cress | cytosol | 30.45 | 30.2 |
| AT2G01818.1 | Thale cress | nucleus | 27.16 | 29.73 |
| AT1G21000.1 | Thale cress | cytosol | 29.22 | 28.86 |
Protein Annotations
| MapMan:15.5.43 | EntrezGene:839990 | ProteinID:AEE31308.1 | ArrayExpress:AT1G31040 | EnsemblPlantsGene:AT1G31040 | RefSeq:AT1G31040 |
| TAIR:AT1G31040 | RefSeq:AT1G31040-TAIR-G | EnsemblPlants:AT1G31040.1 | TAIR:AT1G31040.1 | InterPro:DUF597 | UniProt:F4I7U9 |
| GO:GO:0008150 | RefSeq:NP_174390.2 | PFAM:PF04640 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0025022 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | UniParc:UPI000052A38D | SEG:seg |
Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
Coordinates
chr1:-:11069510..11072564
Molecular Weight (calculated)
27878.4 Da
IEP (calculated)
6.768
GRAVY (calculated)
-0.512
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.