Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P30790_001 | Banana | nucleus | 79.25 | 73.68 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 75.47 | 70.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 72.64 | 69.06 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 74.06 | 64.61 |
| CDX98234 | Canola | cytosol | 46.23 | 56.98 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 50.0 | 55.5 |
| KRH42391 | Soybean | nucleus | 49.06 | 52.0 |
| Solyc02g068510.1.1 | Tomato | cytosol | 58.02 | 51.04 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 62.26 | 50.57 |
| KRH58510 | Soybean | nucleus | 47.17 | 50.25 |
| Bra038403.1-P | Field mustard | cytosol, extracellular, nucleus | 55.66 | 49.17 |
| CDY12444 | Canola | nucleus | 55.66 | 49.17 |
| CDY27171 | Canola | nucleus | 55.66 | 49.17 |
| AT1G31040.1 | Thale cress | nucleus | 55.66 | 48.56 |
| KRH12195 | Soybean | cytosol | 58.02 | 48.24 |
| Bra014899.1-P | Field mustard | nucleus | 55.66 | 47.97 |
| KRH37216 | Soybean | cytosol | 58.02 | 47.67 |
| CDY02353 | Canola | mitochondrion, nucleus | 39.62 | 45.41 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 51.42 | 43.95 |
| CDY43172 | Canola | nucleus | 41.51 | 43.78 |
| GSMUA_Achr11P... | Banana | cytosol | 47.17 | 42.92 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 46.23 | 39.2 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 48.58 | 36.27 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 47.64 | 35.44 |
| GSMUA_AchrUn_... | Banana | cytosol | 33.49 | 35.15 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 32.55 | 34.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.96 | 33.64 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 26.89 | 30.98 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 32.55 | 30.4 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.66 | 29.95 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 30.19 | 29.77 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 33.96 | 29.75 |
| GSMUA_Achr5P18120_001 | Banana | nucleus | 33.49 | 29.58 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 32.08 | 29.57 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 34.43 | 28.85 |
| GSMUA_Achr11P... | Banana | nucleus | 32.08 | 28.22 |
| GSMUA_Achr5P03420_001 | Banana | cytosol | 31.6 | 28.15 |
| Bra023155.1-P | Field mustard | nucleus | 41.98 | 27.38 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 32.08 | 27.31 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 32.08 | 26.56 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P02580_001 | EnsemblPlants:GSMUA_Achr2T02580_001 | EnsemblPlantsGene:GSMUA_Achr2G02580_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31065 | PANTHER:PTHR31065:SF32 | PFAM:PF04640 | PFscan:PS50119 | UniParc:UPI0002967C42 | UniProt:M0S4J9 |
| MapMan:15.5.43 | : | : | : | : | : |
Description
Putative Uncharacterized protein At3g50808 [Source:GMGC_GENE;Acc:GSMUA_Achr2G02580_001]
Coordinates
chr2:-:8370403..8372831
Molecular Weight (calculated)
23945.6 Da
IEP (calculated)
6.899
GRAVY (calculated)
-0.228
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGWLGGLVE ESFFVGCEAH ESRRKNEKNI FCLGCCTSIC THCAPAHRSH PLLQDRVVKA LQHPFNLAFI AVFPVRRYVY NDVVRLDDLE KLVDCCFVQP
101: YTINSAKVVF LKPRPQSRPS KGSSNICLTC DRILQEPFHF CSLSCKVDHV LLRGEDLSSI LFRFEDSDFA FSRFESLQVD EDDGPIAANA TLEQPAQSKE
201: ERKGAPHRSP LS
101: YTINSAKVVF LKPRPQSRPS KGSSNICLTC DRILQEPFHF CSLSCKVDHV LLRGEDLSSI LFRFEDSDFA FSRFESLQVD EDDGPIAANA TLEQPAQSKE
201: ERKGAPHRSP LS
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.