Factsheet for GSMUA_Achr2P18160_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plastid 1
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P18120_001	Banana	nucleus	67.19	70.83
GSMUA_Achr5P03420_001	Banana	cytosol	64.03	68.07
GSMUA_Achr11P...	Banana	nucleus	64.82	68.05
GSMUA_Achr8P14740_001	Banana	cytosol	61.66	67.83
GSMUA_Achr4P27280_001	Banana	nucleus	65.22	66.27
GSMUA_Achr5P13970_001	Banana	nucleus	60.47	63.22
GSMUA_Achr4P19110_001	Banana	nucleus	60.87	60.16
KRH13451	Soybean	cytosol	22.92	59.18
GSMUA_Achr6P36360_001	Banana	cytosol	45.06	56.44
GSMUA_AchrUn_...	Banana	cytosol	43.87	54.95
GSMUA_Achr7P20650_001	Banana	cytosol	39.13	53.8
GSMUA_Achr9P12280_001	Banana	cytosol	44.66	49.78
GSMUA_AchrUn_...	Banana	cytosol	39.92	46.54
GSMUA_Achr7P04460_001	Banana	extracellular	38.74	45.58
KRH45433	Soybean	plastid	39.92	43.16
GSMUA_AchrUn_...	Banana	nucleus	31.62	37.38
GSMUA_Achr2P02580_001	Banana	nucleus	28.85	34.43
GSMUA_Achr7P03600_001	Banana	nucleus	30.04	33.63
GSMUA_AchrUn_...	Banana	nucleus	29.25	33.18
GSMUA_Achr11P...	Banana	cytosol	29.25	31.76
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	30.04	31.28
GSMUA_Achr9P30790_001	Banana	nucleus	28.06	31.14
GSMUA_Achr9P22490_001	Banana	mitochondrion	29.25	29.84
GSMUA_Achr6P30690_001	Banana	nucleus	28.85	29.2
GSMUA_Achr6P20140_001	Banana	extracellular	20.55	27.23
GSMUA_Achr6P35220_001	Banana	nucleus	30.04	26.67
GSMUA_Achr1P09990_001	Banana	nucleus, plastid	28.85	25.7

Protein Annotations

EnsemblPlants:GSMUA_Achr2P18160_001	EnsemblPlants:GSMUA_Achr2T18160_001	EnsemblPlantsGene:GSMUA_Achr2G18160_001	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF8
PFAM:PF04640	SEG:seg	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295B65A	UniProt:M0S907
MapMan:15.5.43	:	:	:	:	:

Description

Putative Uncharacterized protein At3g50808 [Source:GMGC_GENE;Acc:GSMUA_Achr2G18160_001]

Coordinates

chr2:+:18553394..18555040

Molecular Weight (calculated)

28083.7 Da

IEP (calculated)

8.450

GRAVY (calculated)

-0.321

Length

253 amino acids

Sequence
(BLAST)

001: MIKERCISTK QMPCDVMGAS VLSSKLSFFL ILLMLVGLDE GGGVPEENCR WPPWLRPLLS TRFFVQCAVH ADSHKSECNM YCLDCTNGAL CSLCLAHHHR
101: DHRTIQIRRS SYHDVIRVSE VQKMLDITGV QTYIINSARV VFLNERPQPR PGKGVTNNCE VCERSLLDSF RFCSLGCKIA GTANDGSNKK SGEKKTMATA
201: ASSDSDESCT SRGSENSNMT NSFAPSTPQY HRSAKRRKGI PHRAPFESVC VCV

Best Arabidopsis Sequence Match ( AT1G32700.1 )
(BLAST)

001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.