Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g049120.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 30.37 | 40.88 |
| PGSC0003DMT400097455 | Potato | cytosol | 20.56 | 40.74 |
| Solyc07g049130.1.1 | Tomato | nucleus | 29.91 | 40.25 |
| PGSC0003DMT400089328 | Potato | vacuole | 28.5 | 38.36 |
| PGSC0003DMT400090715 | Potato | cytosol | 19.16 | 37.96 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 35.05 | 37.13 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 31.31 | 36.41 |
| GSMUA_AchrUn_... | Banana | cytosol | 34.11 | 36.14 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 37.85 | 35.22 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.51 | 35.02 |
| GSMUA_Achr5P18120_001 | Banana | nucleus | 38.78 | 34.58 |
| Solyc02g033100.1.1 | Tomato | nucleus | 28.97 | 34.25 |
| GSMUA_Achr5P03420_001 | Banana | cytosol | 37.85 | 34.03 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 33.64 | 33.96 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.05 | 33.63 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 35.51 | 33.48 |
| AT2G01818.1 | Thale cress | nucleus | 34.58 | 33.33 |
| PGSC0003DMT400075780 | Potato | nucleus | 31.78 | 33.33 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 38.78 | 33.33 |
| GSMUA_Achr11P... | Banana | nucleus | 37.38 | 33.2 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 35.05 | 33.19 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 33.18 | 33.02 |
| CDY36264 | Canola | nucleus | 29.44 | 32.81 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 36.92 | 32.64 |
| GSMUA_Achr11P... | Banana | cytosol | 35.51 | 32.62 |
| Solyc04g008090.2.1 | Tomato | cytosol | 32.24 | 32.39 |
| CDY09414 | Canola | cytosol | 33.18 | 32.27 |
| KRH49692 | Soybean | nucleus | 33.64 | 32.0 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 37.38 | 31.62 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 33.64 | 31.58 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 35.98 | 31.3 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 36.92 | 30.86 |
| KRH72960 | Soybean | nucleus | 14.49 | 30.69 |
| Solyc02g033110.1.1 | Tomato | nucleus | 22.9 | 30.62 |
| CDY17645 | Canola | nucleus | 33.18 | 30.47 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 34.11 | 30.04 |
| Solyc02g033120.1.1 | Tomato | nucleus | 22.43 | 30.0 |
| Solyc02g036130.1.1 | Tomato | cytosol | 19.16 | 29.93 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 34.58 | 29.84 |
| Solyc02g036230.1.1 | Tomato | nucleus | 25.23 | 29.83 |
| Zm00001d051376_P001 | Maize | cytosol | 27.57 | 29.8 |
| EES07500 | Sorghum | nucleus | 27.1 | 29.0 |
| Solyc02g036170.1.1 | Tomato | nucleus | 22.9 | 28.99 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 25.7 | 28.8 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 26.64 | 28.79 |
| Solyc02g036140.1.1 | Tomato | nucleus | 22.43 | 28.4 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 33.18 | 28.4 |
| KRH60448 | Soybean | nucleus | 31.31 | 28.15 |
| KRH41746 | Soybean | nucleus | 31.31 | 28.15 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 26.64 | 28.08 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 26.64 | 28.08 |
| Solyc02g036200.1.1 | Tomato | nucleus | 22.9 | 27.37 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 35.98 | 27.02 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 33.64 | 25.35 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 19.16 | 25.31 |
| Os02t0661400-00 | Rice | cytosol | 26.64 | 25.22 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP20140_001 | EnsemblPlants:GSMUA_AchrUn_randomT20140_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG20140_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box |
| PANTHER:PTHR31065 | PFAM:PF04640 | PFscan:PS50119 | SEG:seg | SUPFAM:SSF57845 | UniParc:UPI0002964038 |
| UniProt:M0UAS3 | MapMan:15.5.43 | : | : | : | : |
Description
zinc-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG20140_001]
Coordinates
chrchrUn_random:+:97813626..97814355
Molecular Weight (calculated)
23801.4 Da
IEP (calculated)
9.227
GRAVY (calculated)
-0.533
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKKKTTSER AAWLSQLLGS EFFGACEEHK EMRKCEINTY CVDCQGSLCP HCLAPHRAHR LLQIRRYVYQ DVVRILDMQR LLDCSKVQPY TVNSAKVVLL
101: NPRKQSKPSK PNLGVPVCEV CRRSIADPNR YCSIACKTSG SWQSEDALVA VAVADAESSE SESFLPHLTS DVGSSSSSSH PGSLGAGKDW NPDSPPRSRR
201: TRPRKGIPRR APLF
101: NPRKQSKPSK PNLGVPVCEV CRRSIADPNR YCSIACKTSG SWQSEDALVA VAVADAESSE SESFLPHLTS DVGSSSSSSH PGSLGAGKDW NPDSPPRSRR
201: TRPRKGIPRR APLF
001: MNLSEKRRSE EVWIETLLNS EFFGICMNHK YLRKNEKNVF CIDCNVEICR HCCNTVTDSH FLHRRLQICK YVYQDVIRLL EIQNYFDCSE IQTYKINGEK
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A8MQN6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.