Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400089328 | Potato | vacuole | 77.9 | 88.68 |
| Solyc02g036230.1.1 | Tomato | nucleus | 81.77 | 81.77 |
| Solyc07g049130.1.1 | Tomato | nucleus | 71.27 | 81.13 |
| Solyc02g033110.1.1 | Tomato | nucleus | 70.72 | 80.0 |
| Solyc07g049120.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 69.61 | 79.25 |
| Solyc02g033120.1.1 | Tomato | nucleus | 69.61 | 78.75 |
| Solyc02g036170.1.1 | Tomato | nucleus | 71.82 | 76.92 |
| Solyc02g036140.1.1 | Tomato | nucleus | 71.27 | 76.33 |
| Solyc02g036130.1.1 | Tomato | cytosol | 57.46 | 75.91 |
| Solyc02g036200.1.1 | Tomato | nucleus | 71.27 | 72.07 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 52.49 | 58.64 |
| KRH72960 | Soybean | nucleus | 27.62 | 49.51 |
| Solyc04g008090.2.1 | Tomato | cytosol | 36.46 | 30.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.25 | 28.97 |
| Solyc10g085800.1.1 | Tomato | extracellular | 32.04 | 28.29 |
| Solyc08g005100.2.1 | Tomato | cytosol | 33.7 | 27.23 |
| Solyc06g061240.2.1 | Tomato | nucleus | 32.6 | 26.34 |
| Solyc08g076860.2.1 | Tomato | nucleus | 33.15 | 26.32 |
| Solyc02g068510.1.1 | Tomato | cytosol | 33.7 | 25.31 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 27.62 | 25.25 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 27.07 | 24.14 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 27.07 | 24.14 |
| Solyc07g007320.1.1 | Tomato | cytosol | 33.7 | 23.92 |
| Solyc01g091000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 32.6 | 23.6 |
| EES07500 | Sorghum | nucleus | 25.97 | 23.5 |
| Zm00001d051376_P001 | Maize | cytosol | 25.41 | 23.23 |
| Solyc12g010470.1.1 | Tomato | cytosol | 30.94 | 22.76 |
| Os02t0661400-00 | Rice | cytosol | 25.41 | 20.35 |
Protein Annotations
| EnsemblPlants:Solyc02g033100.1.1 | EnsemblPlantsGene:Solyc02g033100.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31065 |
| PANTHER:PTHR31065:SF9 | PFAM:PF04640 | PFscan:PS50119 | SUPFAM:SSF57845 | UniParc:UPI000276771D | UniProt:K4B5Q3 |
| MapMan:15.5.43 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:29830755..29835298
Molecular Weight (calculated)
20883.7 Da
IEP (calculated)
9.216
GRAVY (calculated)
-0.528
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSSNSSHVE TNEQGELEPS RNMPTWLGPL LKKTFFGACL VHDELEKNEL SKYCITCDSY LCKHCICTNK HNDHDKLKIY RHVYKDVVLL EKMEKYIDCK
101: LIQPYKCNKK LVIALNPLPH CGSGSLIVGD PTCLTCKRRL HDPKLFQFCS IACQVEAKWG KIVETKRKRK RKGIPHRAPL K
101: LIQPYKCNKK LVIALNPLPH CGSGSLIVGD PTCLTCKRRL HDPKLFQFCS IACQVEAKWG KIVETKRKRK RKGIPHRAPL K
001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
Arabidopsis Description
At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.