Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07500 | Sorghum | nucleus | 89.39 | 88.5 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 76.26 | 76.26 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 77.78 | 75.86 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 75.76 | 73.89 |
| Os02t0661400-00 | Rice | cytosol | 75.76 | 66.37 |
| PGSC0003DMT400097455 | Potato | cytosol | 17.17 | 31.48 |
| PGSC0003DMT400090715 | Potato | cytosol | 16.67 | 30.56 |
| Solyc07g049120.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 24.24 | 30.19 |
| Solyc07g049130.1.1 | Tomato | nucleus | 24.24 | 30.19 |
| KRH72960 | Soybean | nucleus | 14.14 | 27.72 |
| PGSC0003DMT400089328 | Potato | vacuole | 22.22 | 27.67 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.8 | 27.57 |
| Zm00001d015560_P001 | Maize | nucleus | 31.82 | 26.58 |
| Zm00001d046958_P001 | Maize | nucleus | 32.83 | 26.0 |
| Zm00001d031925_P001 | Maize | cytosol | 27.78 | 25.94 |
| Solyc02g033100.1.1 | Tomato | nucleus | 23.23 | 25.41 |
| CDY17645 | Canola | nucleus | 29.29 | 24.89 |
| CDY09414 | Canola | cytosol | 27.27 | 24.55 |
| PGSC0003DMT400075780 | Potato | nucleus | 25.25 | 24.51 |
| KRH49692 | Soybean | nucleus | 27.78 | 24.44 |
| Solyc02g033120.1.1 | Tomato | nucleus | 19.7 | 24.38 |
| Zm00001d009292_P001 | Maize | extracellular | 26.26 | 24.3 |
| CDY36264 | Canola | nucleus | 23.23 | 23.96 |
| Solyc04g008090.2.1 | Tomato | cytosol | 25.76 | 23.94 |
| Solyc02g033110.1.1 | Tomato | nucleus | 19.19 | 23.75 |
| Solyc02g036170.1.1 | Tomato | nucleus | 20.2 | 23.67 |
| Zm00001d051511_P001 | Maize | nucleus | 29.8 | 23.51 |
| Zm00001d015394_P001 | Maize | cytosol | 30.81 | 23.11 |
| Solyc02g036140.1.1 | Tomato | nucleus | 19.7 | 23.08 |
| AT2G01818.1 | Thale cress | nucleus | 25.76 | 22.97 |
| Zm00001d026047_P002 | Maize | nucleus | 29.29 | 22.92 |
| Zm00001d030032_P002 | Maize | nucleus | 29.29 | 22.83 |
| Zm00001d002489_P001 | Maize | nucleus | 29.29 | 22.66 |
| Solyc02g036230.1.1 | Tomato | nucleus | 20.71 | 22.65 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 27.78 | 22.36 |
| Solyc02g036200.1.1 | Tomato | nucleus | 20.2 | 22.35 |
| Zm00001d017682_P001 | Maize | nucleus | 28.28 | 22.22 |
| Solyc02g036130.1.1 | Tomato | cytosol | 15.15 | 21.9 |
| Zm00001d015868_P001 | Maize | nucleus | 23.74 | 21.86 |
| Zm00001d047025_P001 | Maize | nucleus | 28.28 | 21.46 |
| KRH60448 | Soybean | nucleus | 24.75 | 20.59 |
| KRH41746 | Soybean | nucleus | 24.75 | 20.59 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 16.16 | 19.75 |
Protein Annotations
| EnsemblPlants:Zm00001d051376_P001 | EnsemblPlants:Zm00001d051376_T001 | EnsemblPlantsGene:Zm00001d051376 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF17 |
| PFAM:PF04640 | ProteinID:AQK54112.1 | SEG:seg | UniParc:UPI0004DEB9C0 | UniProt:A0A1D6Q6H4 | MapMan:15.5.43 |
Description
PLATZ-transcription factor 6PLATZ transcription factor family protein
Coordinates
chr4:-:156414146..156415564
Molecular Weight (calculated)
22174.2 Da
IEP (calculated)
8.323
GRAVY (calculated)
-0.582
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPVAARGAP HWLRGLLSEE FFDACAAHPG ERKNDKNHFC VDCAAPLCRH CLPHEHVHDV LQIWKYASCF VVRIDDLKLF DCTGIQSHTV SDHEVVFLNE
101: RTARKRSTSA ENPCAACARP LLPGHDYCSL FCKVKHLGES EHELRRALRV SRQEVAPTPE PQTGRKRSSS SSDAGPSCSG SFRKRSRKQA EPAQAPFH
101: RTARKRSTSA ENPCAACARP LLPGHDYCSL FCKVKHLGES EHELRRALRV SRQEVAPTPE PQTGRKRSSS SSDAGPSCSG SFRKRSRKQA EPAQAPFH
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.