Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30975 | Sorghum | nucleus | 92.06 | 92.06 |
| Zm00001d051511_P001 | Maize | nucleus | 84.92 | 85.26 |
| Os02t0692700-01 | Rice | nucleus | 83.73 | 82.1 |
| KRH75604 | Soybean | nucleus | 62.3 | 74.76 |
| Zm00001d002489_P001 | Maize | nucleus | 72.22 | 71.09 |
| Zm00001d026047_P002 | Maize | nucleus | 71.03 | 70.75 |
| KRH74408 | Soybean | nucleus | 64.29 | 68.64 |
| KRH39550 | Soybean | nucleus | 64.29 | 68.64 |
| PGSC0003DMT400045164 | Potato | nucleus | 60.71 | 67.4 |
| Solyc08g076860.2.1 | Tomato | nucleus | 60.32 | 66.67 |
| KRH24008 | Soybean | cytosol | 57.54 | 65.02 |
| KRH27687 | Soybean | cytosol | 59.92 | 64.81 |
| AT1G32700.1 | Thale cress | cytosol | 54.76 | 64.79 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 59.13 | 64.5 |
| CDY01500 | Canola | nucleus | 54.76 | 64.49 |
| Solyc06g061240.2.1 | Tomato | nucleus | 57.14 | 64.29 |
| PGSC0003DMT400019836 | Potato | nucleus | 56.75 | 64.13 |
| Bra012632.1-P | Field mustard | nucleus | 54.37 | 64.02 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 56.35 | 63.68 |
| CDX90437 | Canola | nucleus | 53.97 | 63.55 |
| Bra035494.1-P | Field mustard | nucleus | 54.76 | 63.01 |
| PGSC0003DMT400046007 | Potato | cytosol | 55.95 | 62.95 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 64.68 | 62.21 |
| AT4G17900.1 | Thale cress | nucleus | 55.95 | 62.11 |
| CDY08880 | Canola | nucleus | 55.16 | 62.05 |
| Solyc08g005100.2.1 | Tomato | cytosol | 54.76 | 61.61 |
| CDX76551 | Canola | nucleus | 54.37 | 61.16 |
| Bra021029.1-P | Field mustard | nucleus | 54.37 | 61.16 |
| CDX78810 | Canola | nucleus | 54.76 | 60.79 |
| CDY44504 | Canola | nucleus | 54.76 | 60.79 |
| KRH77790 | Soybean | nucleus | 60.32 | 60.56 |
| Bra013266.1-P | Field mustard | nucleus | 53.57 | 59.47 |
| CDY35177 | Canola | nucleus | 51.59 | 56.77 |
| CDY03199 | Canola | nucleus | 50.4 | 56.44 |
| Bra017531.1-P | Field mustard | nucleus | 51.19 | 56.33 |
| CDY69910 | Canola | nucleus | 50.4 | 56.19 |
| CDY69918 | Canola | nucleus | 50.0 | 55.75 |
| Bra025003.1-P | Field mustard | nucleus | 49.6 | 55.31 |
| CDY66745 | Canola | nucleus | 47.22 | 53.36 |
| Bra022055.1-P | Field mustard | nucleus | 47.22 | 53.36 |
| Zm00001d030032_P002 | Maize | nucleus | 53.57 | 53.15 |
| CDX87686 | Canola | nucleus | 48.41 | 52.81 |
| CDY72135 | Canola | cytosol, nucleus | 44.84 | 52.56 |
| Zm00001d047025_P001 | Maize | nucleus | 53.97 | 52.11 |
| Bra022058.1-P | Field mustard | nucleus | 46.43 | 51.09 |
| CDX87684 | Canola | nucleus | 46.83 | 50.21 |
| Bra023280.1-P | Field mustard | mitochondrion | 56.35 | 50.18 |
| AT5G46710.1 | Thale cress | nucleus | 44.84 | 50.0 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 55.95 | 49.65 |
| CDY44664 | Canola | plasma membrane | 55.95 | 47.96 |
| Zm00001d031925_P001 | Maize | cytosol | 38.1 | 45.28 |
| Zm00001d009292_P001 | Maize | extracellular | 36.9 | 43.46 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 48.81 | 33.79 |
| Zm00001d015560_P001 | Maize | nucleus | 29.76 | 31.65 |
| Zm00001d015868_P001 | Maize | nucleus | 25.4 | 29.77 |
| Zm00001d015394_P001 | Maize | cytosol | 30.95 | 29.55 |
| Zm00001d046958_P001 | Maize | nucleus | 28.97 | 29.2 |
| Zm00001d051376_P001 | Maize | cytosol | 22.22 | 28.28 |
Protein Annotations
| EMBL:BT087653 | EMBL:KJ727717 | EnsemblPlants:Zm00001d017682_P001 | EnsemblPlants:Zm00001d017682_T001 | EnsemblPlantsGene:Zm00001d017682 | EntrezGene:100502289 |
| InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 | PFAM:PF04640 | ProteinID:AQK73724.1 | SEG:seg |
| UniParc:UPI0001A4BD27 | UniProt:C4JA06 | MapMan:15.5.43 | : | : | : |
Description
PLATZ-transcription factor 11PLATZ transcription factor family protein
Coordinates
chr5:-:204120837..204122561
Molecular Weight (calculated)
27503.8 Da
IEP (calculated)
9.610
GRAVY (calculated)
-0.475
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHAARLG LTSRGATGGG GCGDDVDAEN RRWPPWLKPL LCTSFFVQCR IHADAHKSEC NMYCLDCMDG ALCSLCLARH RDHHSIQIRR SSYHDVIRVS
101: EIHKVLDIAG VQTYIINSAR VVFLNERPQP RPGKGVTNTC EVCERSLLDC FRFCSLGCKI VGTARGYRPK KKHGGGGGGG NKRKRAALKD VRSDSEESCT
201: STSGASSDKS SVVQSFSPST PPPASASYRR PGNKRRKGVP HRSPFGSLIV EF
101: EIHKVLDIAG VQTYIINSAR VVFLNERPQP RPGKGVTNTC EVCERSLLDC FRFCSLGCKI VGTARGYRPK KKHGGGGGGG NKRKRAALKD VRSDSEESCT
201: STSGASSDKS SVVQSFSPST PPPASASYRR PGNKRRKGVP HRSPFGSLIV EF
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.