Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021029.1-P | Field mustard | nucleus | 99.55 | 99.55 |
| CDY08880 | Canola | nucleus | 98.21 | 98.21 |
| CDY01500 | Canola | nucleus | 87.95 | 92.06 |
| CDX90437 | Canola | nucleus | 87.5 | 91.59 |
| AT4G17900.1 | Thale cress | nucleus | 90.18 | 88.99 |
| CDX78810 | Canola | nucleus | 89.73 | 88.55 |
| CDY44504 | Canola | nucleus | 88.39 | 87.22 |
| CDY69918 | Canola | nucleus | 71.43 | 70.8 |
| CDY69910 | Canola | nucleus | 70.98 | 70.35 |
| KRH74408 | Soybean | nucleus | 73.66 | 69.92 |
| CDY03199 | Canola | nucleus | 70.09 | 69.78 |
| KRH75604 | Soybean | nucleus | 65.18 | 69.52 |
| KRH39550 | Soybean | nucleus | 73.21 | 69.49 |
| CDY35177 | Canola | nucleus | 70.98 | 69.43 |
| PGSC0003DMT400045164 | Potato | nucleus | 65.62 | 64.76 |
| Solyc08g076860.2.1 | Tomato | nucleus | 65.62 | 64.47 |
| PGSC0003DMT400019836 | Potato | nucleus | 63.39 | 63.68 |
| PGSC0003DMT400046007 | Potato | cytosol | 63.39 | 63.39 |
| Solyc06g061240.2.1 | Tomato | nucleus | 62.95 | 62.95 |
| CDX87686 | Canola | nucleus | 64.29 | 62.34 |
| CDY66745 | Canola | nucleus | 62.05 | 62.33 |
| Solyc08g005100.2.1 | Tomato | cytosol | 62.05 | 62.05 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 70.54 | 60.31 |
| CDX87684 | Canola | nucleus | 61.61 | 58.72 |
| CDY72135 | Canola | cytosol, nucleus | 56.25 | 58.6 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 62.95 | 57.32 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 63.39 | 57.26 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 62.5 | 56.91 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 62.5 | 56.91 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 62.95 | 56.63 |
| KXG30975 | Sorghum | nucleus | 62.95 | 55.95 |
| Os04t0591100-01 | Rice | nucleus | 62.05 | 55.82 |
| EES12755 | Sorghum | nucleus | 62.5 | 55.78 |
| Os02t0692700-01 | Rice | nucleus | 63.84 | 55.64 |
| Zm00001d002489_P001 | Maize | nucleus | 62.5 | 54.69 |
| Zm00001d026047_P002 | Maize | nucleus | 61.61 | 54.55 |
| Zm00001d017682_P001 | Maize | nucleus | 61.16 | 54.37 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 68.75 | 54.23 |
| Zm00001d051511_P001 | Maize | nucleus | 60.27 | 53.78 |
| CDY44664 | Canola | plasma membrane | 68.75 | 52.38 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 62.95 | 51.27 |
| CDX88300 | Canola | nucleus | 51.34 | 48.52 |
| CDY01340 | Canola | cytosol | 50.45 | 48.5 |
| CDX87583 | Canola | nucleus | 51.34 | 48.32 |
| CDX68093 | Canola | nucleus | 51.34 | 48.12 |
| CDY00356 | Canola | cytosol | 51.34 | 47.13 |
| CDY33661 | Canola | cytosol | 50.89 | 46.91 |
| CDY29486 | Canola | cytosol | 50.89 | 46.72 |
| CDY04591 | Canola | cytosol | 50.89 | 46.72 |
| CDY30518 | Canola | cytosol | 38.84 | 45.55 |
| CDX71409 | Canola | nucleus | 37.5 | 44.68 |
| CDX85958 | Canola | nucleus | 49.55 | 44.4 |
| CDX96610 | Canola | cytosol | 51.34 | 43.56 |
| CDY04518 | Canola | nucleus | 36.61 | 43.39 |
| CDX98234 | Canola | cytosol | 28.57 | 37.21 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 52.23 | 36.45 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 57.59 | 35.44 |
| CDY06424 | Canola | cytosol | 33.04 | 32.46 |
| CDX81439 | Canola | cytosol | 36.16 | 31.64 |
| CDY27171 | Canola | nucleus | 33.48 | 31.25 |
| CDY12444 | Canola | nucleus | 33.48 | 31.25 |
| CDY37203 | Canola | cytosol | 35.27 | 30.98 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 31.7 | 30.87 |
| CDY36264 | Canola | nucleus | 26.34 | 30.73 |
| CDX89067 | Canola | cytosol | 33.93 | 30.65 |
| CDY48369 | Canola | cytosol | 33.48 | 30.12 |
| CDX71792 | Canola | cytosol | 31.7 | 29.22 |
| CDY43172 | Canola | nucleus | 25.89 | 28.86 |
| CDY09414 | Canola | cytosol | 28.12 | 28.64 |
| CDX93111 | Canola | cytosol | 34.82 | 28.16 |
| CDX89603 | Canola | cytosol | 34.82 | 28.16 |
| CDY17645 | Canola | nucleus | 29.02 | 27.9 |
| CDY02353 | Canola | mitochondrion, nucleus | 22.77 | 27.57 |
Protein Annotations
| EnsemblPlants:CDX76551 | EnsemblPlantsGene:GSBRNA2T00126987001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF8 | PFAM:PF04640 |
| ProteinID:CDX76551 | ProteinID:CDX76551.1 | SEG:seg | UniParc:UPI0004EE1511 | MapMan:15.5.43 | : |
Description
BnaA08g08490D
Coordinates
chrLK031807:-:2007265..2009207
Molecular Weight (calculated)
25199.3 Da
IEP (calculated)
9.409
GRAVY (calculated)
-0.616
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIEDQENAI REIKPKNRRI MGAGGPEEED NRQPPWLKPL LQEKFFGHCK FHVDSHKSEC NMYCLDCTNG PLCSLCLAHH KNHHTIQIRR SSYHDVIRVN
101: EIQKHIDISG IQTYVINSAK VIFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGASRGFEK GRKNLVMESD DSSSSIGIGK NIQSFSPSTP
201: PLTASSHCRI AKRRKGIPHR SPMG
101: EIQKHIDISG IQTYVINSAK VIFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGASRGFEK GRKNLVMESD DSSSSIGIGK NIQSFSPSTP
201: PLTASSHCRI AKRRKGIPHR SPMG
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.