Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035494.1-P | Field mustard | nucleus | 75.7 | 98.17 |
| AT1G32700.1 | Thale cress | cytosol | 67.96 | 90.61 |
| CDY44664 | Canola | plasma membrane | 85.92 | 82.99 |
| KRH75604 | Soybean | nucleus | 55.99 | 75.71 |
| KRH74408 | Soybean | nucleus | 60.21 | 72.46 |
| KRH39550 | Soybean | nucleus | 59.86 | 72.03 |
| PGSC0003DMT400045164 | Potato | nucleus | 56.69 | 70.93 |
| Solyc08g076860.2.1 | Tomato | nucleus | 55.99 | 69.74 |
| CDY01500 | Canola | nucleus | 52.46 | 69.63 |
| PGSC0003DMT400046007 | Potato | cytosol | 54.58 | 69.2 |
| CDX76551 | Canola | nucleus | 54.23 | 68.75 |
| CDY08880 | Canola | nucleus | 54.23 | 68.75 |
| CDX90437 | Canola | nucleus | 51.76 | 68.69 |
| PGSC0003DMT400019836 | Potato | nucleus | 53.87 | 68.61 |
| Solyc06g061240.2.1 | Tomato | nucleus | 53.52 | 67.86 |
| CDY44504 | Canola | nucleus | 53.87 | 67.4 |
| CDX78810 | Canola | nucleus | 53.17 | 66.52 |
| Solyc08g005100.2.1 | Tomato | cytosol | 52.46 | 66.52 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 59.86 | 64.89 |
| CDY35177 | Canola | nucleus | 48.59 | 60.26 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 52.46 | 60.08 |
| Os04t0591100-01 | Rice | nucleus | 52.46 | 59.84 |
| CDY03199 | Canola | nucleus | 47.18 | 59.56 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 52.11 | 59.44 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 51.41 | 59.35 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 51.41 | 59.35 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 51.06 | 58.94 |
| EES12755 | Sorghum | nucleus | 51.41 | 58.17 |
| Os02t0692700-01 | Rice | nucleus | 52.11 | 57.59 |
| CDY69910 | Canola | nucleus | 45.77 | 57.52 |
| CDY69918 | Canola | nucleus | 45.42 | 57.08 |
| Zm00001d002489_P001 | Maize | nucleus | 51.41 | 57.03 |
| KXG30975 | Sorghum | nucleus | 50.35 | 56.75 |
| Zm00001d026047_P002 | Maize | nucleus | 50.0 | 56.13 |
| Zm00001d017682_P001 | Maize | nucleus | 49.65 | 55.95 |
| CDY66745 | Canola | nucleus | 43.31 | 55.16 |
| Zm00001d051511_P001 | Maize | nucleus | 48.24 | 54.58 |
| CDX87686 | Canola | nucleus | 44.37 | 54.55 |
| CDY72135 | Canola | cytosol, nucleus | 40.85 | 53.95 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 52.11 | 53.82 |
| CDX87684 | Canola | nucleus | 42.96 | 51.91 |
| CDY01340 | Canola | cytosol | 41.55 | 50.64 |
| CDX87583 | Canola | nucleus | 41.55 | 49.58 |
| CDX68093 | Canola | nucleus | 41.55 | 49.37 |
| CDX88300 | Canola | nucleus | 41.2 | 49.37 |
| CDY30518 | Canola | cytosol | 32.75 | 48.69 |
| CDY00356 | Canola | cytosol | 41.55 | 48.36 |
| CDY04591 | Canola | cytosol | 41.2 | 47.95 |
| CDY29486 | Canola | cytosol | 41.2 | 47.95 |
| CDX71409 | Canola | nucleus | 31.69 | 47.87 |
| CDY33661 | Canola | cytosol | 40.85 | 47.74 |
| CDY04518 | Canola | nucleus | 31.69 | 47.62 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 58.45 | 45.6 |
| CDX85958 | Canola | nucleus | 40.14 | 45.6 |
| CDX96610 | Canola | cytosol | 41.2 | 44.32 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 44.37 | 39.25 |
| CDX98234 | Canola | cytosol | 21.83 | 36.05 |
| CDY06424 | Canola | cytosol | 26.41 | 32.89 |
| CDX81439 | Canola | cytosol | 28.17 | 31.25 |
| CDY37203 | Canola | cytosol | 27.82 | 30.98 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 25.0 | 30.87 |
| CDY36264 | Canola | nucleus | 20.77 | 30.73 |
| CDX89067 | Canola | cytosol | 26.76 | 30.65 |
| CDY48369 | Canola | cytosol | 26.76 | 30.52 |
| CDY12444 | Canola | nucleus | 25.35 | 30.0 |
| CDY27171 | Canola | nucleus | 25.35 | 30.0 |
| CDX93111 | Canola | cytosol | 28.52 | 29.24 |
| CDX71792 | Canola | cytosol | 25.0 | 29.22 |
| CDX89603 | Canola | cytosol | 28.17 | 28.88 |
| CDY09414 | Canola | cytosol | 21.13 | 27.27 |
| CDY17645 | Canola | nucleus | 22.18 | 27.04 |
| CDY43172 | Canola | nucleus | 18.66 | 26.37 |
| CDY02353 | Canola | mitochondrion, nucleus | 16.9 | 25.95 |
Protein Annotations
| EnsemblPlants:CDX84082 | EnsemblPlantsGene:GSBRNA2T00140014001 | GO:A0A078D4R2 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF8 |
| PFAM:PF04640 | ProteinID:CDX84082 | ProteinID:CDX84082.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE369A |
| MapMan:15.5.43 | : | : | : | : | : |
Description
BnaC08g07590D
Coordinates
chrLK031835:+:935853..938682
Molecular Weight (calculated)
32315.8 Da
IEP (calculated)
9.305
GRAVY (calculated)
-0.412
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEREEYMRE MSKTNIKKRL FVLVSTRACL SPLLCFYNSL SLSLILFLSL KLAIEENQQA SVREIMGSEE ENSKSWPPWL KPLLQEKFFV QCKLHADSHK
101: SECNMYCLDC TNGPLCSFCL SFHKDHHAIQ IRRSSYHDVI RVSEIQKFLD ITGVQTYVIN SAKVVFLNER PQPRPGKGVV NTCQVCYRSL VDSFRFCSLG
201: CKISGTSKNF DKKRKDSTNN LSDSDDSYSS TTTSNGRLKK NSDMINNNSF TPSTPPLSAV NGRIVKRRKG IPHRAPFGGL IIEY
101: SECNMYCLDC TNGPLCSFCL SFHKDHHAIQ IRRSSYHDVI RVSEIQKFLD ITGVQTYVIN SAKVVFLNER PQPRPGKGVV NTCQVCYRSL VDSFRFCSLG
201: CKISGTSKNF DKKRKDSTNN LSDSDDSYSS TTTSNGRLKK NSDMINNNSF TPSTPPLSAV NGRIVKRRKG IPHRAPFGGL IIEY
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.