Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037203.1-P | Field mustard | cytosol | 95.31 | 95.69 |
| CDY37203 | Canola | cytosol | 95.31 | 95.69 |
| AT2G12646.1 | Thale cress | nucleus | 87.5 | 87.5 |
| CDX93111 | Canola | cytosol | 91.41 | 84.48 |
| CDX89603 | Canola | cytosol | 91.02 | 84.12 |
| KRH37851 | Soybean | nucleus | 64.45 | 69.04 |
| KRH12861 | Soybean | nucleus | 64.06 | 68.62 |
| KRH20236 | Soybean | nucleus | 66.02 | 68.42 |
| KRH03576 | Soybean | nucleus | 66.02 | 68.15 |
| PGSC0003DMT400020401 | Potato | cytosol | 62.89 | 65.45 |
| Solyc12g010470.1.1 | Tomato | cytosol | 62.5 | 65.04 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 61.72 | 64.49 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 58.98 | 63.71 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 58.98 | 63.71 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 58.98 | 63.71 |
| Solyc07g007320.1.1 | Tomato | cytosol | 63.28 | 63.53 |
| HORVU6Hr1G028520.1 | Barley | cytosol, extracellular, nucleus | 58.59 | 63.29 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 58.2 | 62.87 |
| Zm00001d015560_P001 | Maize | nucleus | 57.81 | 62.45 |
| KXG29636 | Sorghum | nucleus | 57.42 | 62.03 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 57.42 | 59.27 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 51.56 | 52.8 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 57.42 | 51.76 |
| CDX98234 | Canola | cytosol | 34.77 | 51.74 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 55.86 | 50.18 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 39.84 | 44.35 |
| CDX89067 | Canola | cytosol | 42.58 | 43.95 |
| CDY48369 | Canola | cytosol | 42.58 | 43.78 |
| CDY12444 | Canola | nucleus | 39.45 | 42.08 |
| CDX71792 | Canola | cytosol | 39.84 | 41.98 |
| CDY27171 | Canola | nucleus | 39.06 | 41.67 |
| CDY01500 | Canola | nucleus | 31.64 | 37.85 |
| CDX90437 | Canola | nucleus | 31.64 | 37.85 |
| CDY02353 | Canola | mitochondrion, nucleus | 26.56 | 36.76 |
| CDY72135 | Canola | cytosol, nucleus | 30.47 | 36.28 |
| CDX76551 | Canola | nucleus | 31.64 | 36.16 |
| CDX78810 | Canola | nucleus | 32.03 | 36.12 |
| CDY44504 | Canola | nucleus | 32.03 | 36.12 |
| CDY03199 | Canola | nucleus | 31.64 | 36.0 |
| CDY66745 | Canola | nucleus | 31.25 | 35.87 |
| CDY08880 | Canola | nucleus | 31.25 | 35.71 |
| CDY43172 | Canola | nucleus | 27.73 | 35.32 |
| CDY30518 | Canola | cytosol | 26.17 | 35.08 |
| CDY35177 | Canola | nucleus | 31.25 | 34.93 |
| CDX87686 | Canola | nucleus | 31.25 | 34.63 |
| CDY69910 | Canola | nucleus | 30.47 | 34.51 |
| CDY69918 | Canola | nucleus | 30.08 | 34.07 |
| CDX87684 | Canola | nucleus | 30.86 | 33.62 |
| CDX71409 | Canola | nucleus | 24.61 | 33.51 |
| CDY04518 | Canola | nucleus | 24.61 | 33.33 |
| CDY01340 | Canola | cytosol | 28.91 | 31.76 |
| CDX88300 | Canola | nucleus | 29.3 | 31.65 |
| CDX87583 | Canola | nucleus | 29.3 | 31.51 |
| CDY29486 | Canola | cytosol | 29.3 | 30.74 |
| CDY04591 | Canola | cytosol | 29.3 | 30.74 |
| CDY36264 | Canola | nucleus | 23.05 | 30.73 |
| CDX68093 | Canola | nucleus | 28.52 | 30.54 |
| CDY00356 | Canola | cytosol | 28.91 | 30.33 |
| CDY33661 | Canola | cytosol | 27.73 | 29.22 |
| CDY17645 | Canola | nucleus | 26.17 | 28.76 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 31.25 | 28.17 |
| CDX85958 | Canola | nucleus | 27.34 | 28.0 |
| CDY09414 | Canola | cytosol | 23.83 | 27.73 |
| CDX96610 | Canola | cytosol | 28.12 | 27.27 |
| CDY44664 | Canola | plasma membrane | 31.25 | 27.21 |
| CDY06424 | Canola | cytosol | 21.09 | 23.68 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 29.69 | 20.88 |
Protein Annotations
| EnsemblPlants:CDX81439 | EnsemblPlantsGene:GSBRNA2T00135022001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF11 | PFAM:PF04640 |
| ProteinID:CDX81439 | ProteinID:CDX81439.1 | SEG:seg | UniParc:UPI0004EDBC1B | MapMan:15.5.43 | : |
Description
BnaC09g08500D
Coordinates
chrLK031824:+:1794819..1796614
Molecular Weight (calculated)
29337.1 Da
IEP (calculated)
8.098
GRAVY (calculated)
-0.412
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MKEIIELWYE IKPAWLDALY AEKFFVGCPY HETAKKNEKN VCCLDCCISL CPHCVPSHRY HRLLQVRRYV YHEVIRLEDL QKLIDCSNVQ AYTINSAKVV
101: FIKKRPQNRQ FKGAGNYCTS CDRSLQEPFI HCSLGCKVEF VMKRYRDITP FIKPCHTLTL GPDYIIPQDL HADDNMAAYE TPRSTVVDGD DSMSWSSTSS
201: ELGDAATTTH VVRKKRTGFC FCAKSANSYK AVSEDPDDIS NCINRRKGIP QRSPLC
101: FIKKRPQNRQ FKGAGNYCTS CDRSLQEPFI HCSLGCKVEF VMKRYRDITP FIKPCHTLTL GPDYIIPQDL HADDNMAAYE TPRSTVVDGD DSMSWSSTSS
201: ELGDAATTTH VVRKKRTGFC FCAKSANSYK AVSEDPDDIS NCINRRKGIP QRSPLC
001: MKPAWLDALY AEKFFVGCPY HETAKKNERN VCCLDCCTSL CPHCVPSHRF HRLLQVRRYV YHDVVRLEDL QKLIDCSNVQ AYTINSAKVV FIKKRPQNRQ
101: FKGAGNYCTS CDRSLQEPYI HCSLGCKVDF VMKRYRDITP FLKPCHTLTL GPDYIIPQDL LTDDEVAAYE TPRSTVVDGD ESMSWSSASS DNNNAGAAAA
201: YAATTTHVVR KKRTGFCLCA KSANSYKEVS EDPDDISACI NRRKGVPQRS PLC
101: FKGAGNYCTS CDRSLQEPYI HCSLGCKVDF VMKRYRDITP FLKPCHTLTL GPDYIIPQDL LTDDEVAAYE TPRSTVVDGD ESMSWSSASS DNNNAGAAAA
201: YAATTTHVVR KKRTGFCLCA KSANSYKEVS EDPDDISACI NRRKGVPQRS PLC
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.