CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	extracellular, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0183000-00	Rice	cytosol, extracellular, nucleus	96.62	96.62
Zm00001d015560_P001	Maize	nucleus	95.78	95.78
TraesCS6B01G173400.1	Wheat	nucleus	91.98	91.98
TraesCS6D01G134200.1	Wheat	nucleus	91.56	91.56
HORVU6Hr1G028520.1	Barley	cytosol, extracellular, nucleus	91.56	91.56
TraesCS6A01G145200.1	Wheat	nucleus	90.72	90.72
GSMUA_Achr9P22490_001	Banana	mitochondrion	75.95	72.58
VIT_11s0118g00600.t01	Wine grape	nucleus	73.0	70.61
KRH37851	Soybean	nucleus	69.62	69.04
KRH12861	Soybean	nucleus	69.62	69.04
KRH20236	Soybean	nucleus	71.31	68.42
KRH03576	Soybean	nucleus	71.31	68.15
Solyc07g007320.1.1	Tomato	cytosol	71.73	66.67
PGSC0003DMT400020401	Potato	cytosol	68.35	65.85
Solyc12g010470.1.1	Tomato	cytosol	67.93	65.45
GSMUA_Achr1P09990_001	Banana	nucleus, plastid	77.64	64.79
GSMUA_Achr6P30690_001	Banana	nucleus	66.24	62.8
AT2G12646.1	Thale cress	nucleus	64.98	60.16
GSMUA_Achr6P35220_001	Banana	nucleus	71.31	59.3
CDY37203	Canola	cytosol	62.03	57.65
Bra037203.1-P	Field mustard	cytosol	62.03	57.65
CDX81439	Canola	cytosol	62.03	57.42
Bra013149.1-P	Field mustard	cytosol	62.87	53.79
CDX93111	Canola	cytosol	62.87	53.79
CDX89603	Canola	cytosol	62.45	53.43
EES04603	Sorghum	nucleus	48.1	44.19
EER90181	Sorghum	cytosol	45.57	43.72
KXG25377	Sorghum	extracellular	29.96	33.65
EES15787	Sorghum	endoplasmic reticulum	29.11	32.24
EES07500	Sorghum	nucleus	27.0	32.0
OQU78879	Sorghum	endoplasmic reticulum	28.69	31.92
EES12755	Sorghum	nucleus	32.07	30.28
KXG30975	Sorghum	nucleus	32.07	30.16
OQU76729	Sorghum	cytosol, plastid	31.65	29.3
OQU84555	Sorghum	cytosol	15.61	28.03
EER91885	Sorghum	nucleus	29.96	27.31
KXG29686	Sorghum	cytosol	20.25	25.13
EES04679	Sorghum	cytosol	19.83	24.48

Protein Annotations

EnsemblPlants:KXG29636	EnsemblPlantsGene:SORBI_3004G067800	EntrezGene:8079414	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF11
PFAM:PF04640	ProteinID:KXG29636	ProteinID:KXG29636.1	UniParc:UPI0007F21A26	UniProt:A0A194YN73	MapMan:15.5.43

Description

hypothetical protein

Coordinates

chr4:-:5524235..5525394

Molecular Weight (calculated)

27093.5 Da

IEP (calculated)

8.443

GRAVY (calculated)

-0.483

Length

237 amino acids

Sequence
(BLAST)

001: MIMQAMWKPA WLEALNTQKF FVACSLHEHA KKNEKNICCL DCCTSICPHC VGAHRVHRLL QVRRYVYHDV VRLEDLEKLV DCSSVQSYTI NSSKVVFLKK
101: RPQNRQFKGS GNICTSCDRS LQEPYFHCSL DCKVEYILRQ KKNLSAYLRP CKTLQLGPDF FIPHDADDDT THSTLVDVDE PMGSSDSENL SAPCTNFVRK
201: KRSGPYICAR SANRVSDEDM ATNMSRRKGV PHRSPLC

Best Arabidopsis Sequence Match ( AT2G12646.1 )
(BLAST)

001: MGIQKPAWLD ALYAEKFFVG CPYHETAKKN ERNVCCLDCC TSLCPHCVPS HRFHRLLQVR RYVYHDVVRL EDLQKLIDCS NVQAYTINSA KVVFIKKRPQ
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.