Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017682_P001 | Maize | nucleus | 92.06 | 92.06 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 83.73 | 85.08 |
| Os02t0692700-01 | Rice | nucleus | 86.51 | 84.82 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 83.73 | 84.74 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 84.13 | 77.09 |
| KRH75604 | Soybean | nucleus | 63.89 | 76.67 |
| EES12755 | Sorghum | nucleus | 75.4 | 75.7 |
| KRH74408 | Soybean | nucleus | 67.06 | 71.61 |
| KRH39550 | Soybean | nucleus | 66.67 | 71.19 |
| PGSC0003DMT400045164 | Potato | nucleus | 62.3 | 69.16 |
| Solyc08g076860.2.1 | Tomato | nucleus | 61.9 | 68.42 |
| Solyc06g061240.2.1 | Tomato | nucleus | 59.13 | 66.52 |
| PGSC0003DMT400019836 | Potato | nucleus | 58.73 | 66.37 |
| CDY01500 | Canola | nucleus | 56.35 | 66.36 |
| Bra012632.1-P | Field mustard | nucleus | 55.95 | 65.89 |
| AT1G32700.1 | Thale cress | cytosol | 55.56 | 65.73 |
| CDX90437 | Canola | nucleus | 55.56 | 65.42 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 59.92 | 65.37 |
| KRH24008 | Soybean | cytosol | 57.54 | 65.02 |
| KRH27687 | Soybean | cytosol | 59.92 | 64.81 |
| AT4G17900.1 | Thale cress | nucleus | 58.33 | 64.76 |
| PGSC0003DMT400046007 | Potato | cytosol | 57.54 | 64.73 |
| Bra035494.1-P | Field mustard | nucleus | 55.56 | 63.93 |
| CDY08880 | Canola | nucleus | 56.75 | 63.84 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 56.35 | 63.68 |
| CDY44504 | Canola | nucleus | 57.14 | 63.44 |
| CDX78810 | Canola | nucleus | 57.14 | 63.44 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 65.87 | 63.36 |
| Bra021029.1-P | Field mustard | nucleus | 55.95 | 62.95 |
| Solyc08g005100.2.1 | Tomato | cytosol | 55.95 | 62.95 |
| CDX76551 | Canola | nucleus | 55.95 | 62.95 |
| Bra013266.1-P | Field mustard | nucleus | 55.95 | 62.11 |
| KRH77790 | Soybean | nucleus | 60.71 | 60.96 |
| CDY35177 | Canola | nucleus | 53.57 | 58.95 |
| CDY69910 | Canola | nucleus | 52.78 | 58.85 |
| CDY03199 | Canola | nucleus | 52.38 | 58.67 |
| Bra017531.1-P | Field mustard | nucleus | 53.17 | 58.52 |
| CDY69918 | Canola | nucleus | 52.38 | 58.41 |
| Bra025003.1-P | Field mustard | nucleus | 51.98 | 57.96 |
| CDY66745 | Canola | nucleus | 49.21 | 55.61 |
| Bra022055.1-P | Field mustard | nucleus | 49.21 | 55.61 |
| CDX87686 | Canola | nucleus | 50.4 | 54.98 |
| CDY72135 | Canola | cytosol, nucleus | 46.83 | 54.88 |
| EER91885 | Sorghum | nucleus | 55.95 | 54.23 |
| Bra022058.1-P | Field mustard | nucleus | 48.81 | 53.71 |
| CDX87684 | Canola | nucleus | 49.21 | 52.77 |
| AT5G46710.1 | Thale cress | nucleus | 46.83 | 52.21 |
| Bra023280.1-P | Field mustard | mitochondrion | 57.14 | 50.88 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 56.75 | 50.35 |
| CDY44664 | Canola | plasma membrane | 56.75 | 48.64 |
| KXG25377 | Sorghum | extracellular | 38.1 | 45.5 |
| EES15787 | Sorghum | endoplasmic reticulum | 38.1 | 44.86 |
| OQU78879 | Sorghum | endoplasmic reticulum | 37.7 | 44.6 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 55.95 | 43.93 |
| OQU76729 | Sorghum | cytosol, plastid | 42.86 | 42.19 |
| OQU84555 | Sorghum | cytosol | 19.05 | 36.36 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 49.21 | 34.07 |
| EES04679 | Sorghum | cytosol | 25.79 | 33.85 |
| KXG29686 | Sorghum | cytosol | 25.4 | 33.51 |
| KXG29636 | Sorghum | nucleus | 30.16 | 32.07 |
| EER90181 | Sorghum | cytosol | 30.16 | 30.77 |
| EES07500 | Sorghum | nucleus | 24.21 | 30.5 |
| EES04603 | Sorghum | nucleus | 30.56 | 29.84 |
Protein Annotations
| EnsemblPlants:KXG30975 | EnsemblPlantsGene:SORBI_3004G275200 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 | PFAM:PF04640 |
| ProteinID:KXG30975 | ProteinID:KXG30975.1 | SEG:seg | UniParc:UPI0002207221 | UniProt:A0A194YT18 | MapMan:15.5.43 |
Description
hypothetical protein
Coordinates
chr4:+:61862258..61864319
Molecular Weight (calculated)
27749.2 Da
IEP (calculated)
9.573
GRAVY (calculated)
-0.505
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHATPLG LKSRGAMGGG ECDYDDAENQ RWPPWLKPLL STSFFVQCRI HADAHKSECN MYCLDCMNGA LCSLCLAHHR DHHSIQIRRS SYHDVIRVSE
101: IQKVLDIAGV QTYIINSARV VFLNERPQPR PGKGVTNTCE VCERSLLDCF RFCSLGCKIV GTARGYRPKK KHGIGGGGHK KKRAALKVKD VRSDSEDSCT
201: STSGASSDKS SVVQSFSPST PPPTSASHRR PGNKRRKGVP HRSPFGSLIV EF
101: IQKVLDIAGV QTYIINSARV VFLNERPQPR PGKGVTNTCE VCERSLLDCF RFCSLGCKIV GTARGYRPKK KHGIGGGGHK KKRAALKVKD VRSDSEDSCT
201: STSGASSDKS SVVQSFSPST PPPTSASHRR PGNKRRKGVP HRSPFGSLIV EF
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.